Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107443537 Ptep1.0/2.0 NW_024969659.1 478057 505195 - uncharacterized LOC107443537 aug3.g471 LOC107443537 0
LOC122270880 Ptep1.0/2.0 NW_024970422.1 81128 90777 + prostatic spermine-binding protein-like aug3.g4711 NA 4e-105
LOC107454683 Ptep1.0/2.0 NW_024970534.1 56058 58890 - uncharacterized LOC107454683 aug3.g5022,aug3.g13632,aug3.g14582,aug3.g8596,aug3.g6454,aug3.g17754,aug3.g21381,aug3.g4714,aug3.g19932 LOC107454683 0
LOC122271229 Ptep1.0/2.0 NW_024970653.1 181436 182977 - uncharacterized LOC122271229 aug3.g4714 NA 0
LOC122271964 Ptep1.0/2.0 NW_024971345.1 16169 17413 - uncharacterized LOC122271964 aug3.g4714 NA 0
LOC122272003 Ptep1.0/2.0 NW_024971390.1 28250 29542 - uncharacterized LOC122272003 aug3.g4714 NA 0
LOC107452376 Ptep1.0/2.0 NW_024971390.1 49619 51912 + uncharacterized LOC107452376 aug3.g4715,aug3.g2963,aug3.g14240,aug3.g12590,aug3.g19641,aug3.g10210 LOC107452376 0
LOC107452373 Ptep1.0/2.0 NW_024971390.1 56636 58279 + uncharacterized LOC107452373 aug3.g4712,aug3.g453,aug3.g16460 LOC107452373 0
LOC122272149 Ptep1.0/2.0 NW_024971563.1 30177 31644 - uncharacterized LOC122272149 aug3.g4712 NA 0
LOC122272238 Ptep1.0/2.0 NW_024971676.1 7701 9131 + uncharacterized LOC122272238 aug3.g4714 NA 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02