Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107443635 Ptep1.0/2.0 NW_024969977.1 660193 783155 + lysosome membrane protein 2 aug3.g485 LOC107443635 0
LOC107443634 Ptep1.0/2.0 NW_024969977.1 788386 868807 - platelet glycoprotein 4 aug3.g486,aug3.g485 LOC107443634 0
LOC107452571 Ptep1.0/2.0 NW_024970093.1 1321 14035 + uncharacterized LOC107452571 aug3.g4856 LOC107452571 0
LOC107452564 Ptep1.0/2.0 NW_024970093.1 16623 21571 - U8 snoRNA-decapping enzyme aug3.g4855 LOC107452564 0
LOC107452562 Ptep1.0/2.0 NW_024970093.1 21623 38635 + prolactin regulatory element-binding protein aug3.g4854 LOC107452562 0
LOC107452563 Ptep1.0/2.0 NW_024970093.1 42105 53359 - formylglycine-generating enzyme aug3.g4853 LOC107452563 0
LOC107452566 Ptep1.0/2.0 NW_024970093.1 60287 83734 - integrator complex subunit 13 aug3.g4851 LOC107452566 0
LOC107452565 Ptep1.0/2.0 NW_024970093.1 83640 118892 + protein MCM10 homolog aug3.g4850 LOC107452565 0
LOC107452559 Ptep1.0/2.0 NW_024970493.1 966 4689 + BEN domain-containing protein 5-like aug3.g4859 LOC107452559 0
LOC107452560 Ptep1.0/2.0 NW_024970493.1 6466 132985 + SET and MYND domain-containing protein 5 aug3.g4858 LOC107452560 0
LOC122270994 Ptep1.0/2.0 NW_024970493.1 103406 128375 + uncharacterized LOC122270994 aug3.g4856 NA 2e-155
LOC122271975 Ptep1.0/2.0 NW_024971365.1 19292 24312 + uncharacterized LOC122271975 aug3.g4856 NA 2e-62
12 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02