Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107452587 Ptep1.0/2.0 NW_024969610.1 1663609 1670456 + zinc finger protein 236 aug3.g4869 LOC107452587 0
LOC107452590 Ptep1.0/2.0 NW_024969610.1 1677470 1687726 - peptidase M20 domain-containing protein 2 aug3.g4868 LOC107452590 0
LOC107452591 Ptep1.0/2.0 NW_024969610.1 1693263 1709036 + peptidase M20 domain-containing protein 2 aug3.g4867,aug3.g6320 LOC107452591 0
LOC107451044 Ptep1.0/2.0 NW_024969924.1 216082 220159 + uncharacterized protein K02A2.6-like aug3.g15661,aug3.g4862,aug3.g7909 LOC107451044 0
LOC107443634 Ptep1.0/2.0 NW_024969977.1 788386 868807 - platelet glycoprotein 4 aug3.g486,aug3.g485 LOC107443634 0
LOC107451380 Ptep1.0/2.0 NW_024970765.1 2286 12605 - ubiquitin-like protein 4A aug3.g3991,aug3.g4866 LOC107451380 0
LOC107452578 Ptep1.0/2.0 NW_024970765.1 12619 82585 + ribonuclease 3 aug3.g4865 LOC107452578 0
LOC107452575 Ptep1.0/2.0 NW_024970765.1 89280 128023 + DC-STAMP domain-containing protein 2 aug3.g4864 LOC107452575 0
LOC107452576 Ptep1.0/2.0 NW_024970765.1 134328 179912 - uncharacterized LOC107452576 aug3.g4863 LOC107452576 0
LOC122271375 Ptep1.0/2.0 NW_024970765.1 212346 213027 + uncharacterized LOC122271375 aug3.g4862 NA 7e-178
LOC107452580 Ptep1.0/2.0 NW_024970765.1 215646 251738 + F-box only protein 38 aug3.g4861 LOC107452580 0
LOC122271376 Ptep1.0/2.0 NW_024970765.1 255752 264400 + uncharacterized LOC122271376 aug3.g4861 LOC107452580 3e-174
LOC107454057 Ptep1.0/2.0 NW_024971476.1 10540 25935 - uncharacterized LOC107454057 aug3.g4860,aug3.g13596 LOC107454057 8e-102
LOC122272504 Ptep1.0/2.0 NW_024972134.1 33 3064 + uncharacterized LOC122272504 aug3.g4860 NA 9e-58
14 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02