Pt_spiderBASE v3

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]

Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107443697 Ptep1.0/2.0 NW_024969801.1 1230161 1276717 - long-chain-fatty-acid--CoA ligase 4 aug3.g510,aug3.g15554 LOC107443697 0
LOC107452935 Ptep1.0/2.0 NW_024970365.1 2644 23904 + protein arginine N-methyltransferase 6 aug3.g5106 LOC107452935 0
LOC107452929 Ptep1.0/2.0 NW_024970365.1 25353 28584 - uncharacterized LOC107452929 aug3.g5105 LOC107452929 0
LOC107452947 Ptep1.0/2.0 NW_024970365.1 31463 74105 - sulfate transporter aug3.g5105,aug3.g5104,aug3.g21158 LOC107452947 0
LOC107452939 Ptep1.0/2.0 NW_024970365.1 78459 138786 - uncharacterized LOC107452939 aug3.g5102 LOC107452939 0
LOC107452948 Ptep1.0/2.0 NW_024970365.1 116082 134752 + uncharacterized LOC107452948 aug3.g5101 LOC107452948 0
LOC107452950 Ptep1.0/2.0 NW_024970365.1 140509 170628 - protein PF14_0175 aug3.g5100 LOC107452940,LOC107452950 0
LOC107443921 Ptep1.0/2.0 NW_024971566.1 8359 32408 + glucose dehydrogenase [FAD, quinone]-like aug3.g17554,aug3.g5109,aug3.g17556 LOC107452938,LOC107443921 0
LOC107452936 Ptep1.0/2.0 NW_024971566.1 33128 67307 - protein MLP1 aug3.g5108 LOC107452936 0
LOC122272993 Ptep1.0/2.0 NW_024973631.1 1762 9463 + serologically defined colon cancer antigen 8 homolog aug3.g5108 NA 0
LOC122273998 Ptep1.0/2.0 NW_024986289.1 1279 1596 - uncharacterized LOC122273998 aug3.g5105 LOC107452947 2e-70
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]
Last updated by Hiroki Oda, 2022.11.02