Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107453651 Ptep1.0/2.0 NW_024969696.1 1384745 1418324 - uncharacterized LOC107453651 aug3.g5660 LOC107453651 0
LOC107453654 Ptep1.0/2.0 NW_024969696.1 1480849 1481706 + speckle-type POZ protein-like aug3.g5661 LOC107453654 0
LOC107453656 Ptep1.0/2.0 NW_024969696.1 1486958 1536344 - tudor domain-containing protein 7 aug3.g5662 LOC107453656 0
LOC122268877 Ptep1.0/2.0 NW_024969696.1 1539049 1549108 - tudor domain-containing protein 7-like aug3.g5662 LOC107453656 0
LOC107453659 Ptep1.0/2.0 NW_024969696.1 1560140 1569816 - uncharacterized LOC107453659 aug3.g5663 LOC107453659 0
LOC122268882 Ptep1.0/2.0 NW_024969696.1 1588405 1599924 + uncharacterized LOC122268882 aug3.g5664 NA 2e-113
LOC107453655 Ptep1.0/2.0 NW_024969696.1 1744520 1760772 - RNA-binding protein MEX3B aug3.g5665 LOC107453655 0
LOC110282006 Ptep1.0/2.0 NW_024969696.1 1774699 1792634 + calcium and integrin-binding family member 3-like aug3.g5666 LOC110282006 0
LOC107453652 Ptep1.0/2.0 NW_024969696.1 1804102 1877387 - tetratricopeptide repeat protein 37 aug3.g5667 LOC107453652 0
LOC107453658 Ptep1.0/2.0 NW_024969696.1 1877593 1891905 + uncharacterized LOC107453658 aug3.g5668,aug3.g4017 LOC107453658 0
LOC107443879 Ptep1.0/2.0 NW_024969903.1 111349 185734 - band 4.1-like protein 5 aug3.g566,aug3.g567 LOC107443879 0
LOC107447885 Ptep1.0/2.0 NW_024970748.1 23070 32044 - TD and POZ domain-containing protein 1-like aug3.g20031,aug3.g5661,aug3.g20820,aug3.g20626,aug3.g20819 LOC107447885 0
LOC122273163 Ptep1.0/2.0 NW_024974477.1 2767 6043 - dual specificity tyrosine-phosphorylation-regulated kinase 2-like aug3.g5660 LOC107453651 0
LOC122268635 Ptep1.0/2.0 NW_025011188.1 1 461 + uncharacterized LOC122268635 aug3.g5662 NA 0
14 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02