Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107453750 Ptep1.0/2.0 NW_024970156.1 11309 35411 - cytochrome b-c1 complex subunit 1, mitochondrial aug3.g5769 LOC107453750 0
LOC107453762 Ptep1.0/2.0 NW_024970156.1 35488 50747 + uncharacterized LOC107453762 aug3.g5768,aug3.g6764 LOC107453762 3e-50
LOC122270380 Ptep1.0/2.0 NW_024970156.1 53941 59406 + uncharacterized LOC122270380 aug3.g5768 NA 2e-36
LOC107453759 Ptep1.0/2.0 NW_024970156.1 59785 75686 + zinc finger protein 184-like aug3.g5767 LOC107453759 0
LOC107453751 Ptep1.0/2.0 NW_024970156.1 83699 113341 - poly(A) polymerase type 3 aug3.g5766 LOC107453751 0
LOC107453761 Ptep1.0/2.0 NW_024970156.1 135406 150889 + dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial aug3.g5765 LOC107453761 0
LOC107453749 Ptep1.0/2.0 NW_024970156.1 152358 175938 - atypical kinase COQ8B, mitochondrial aug3.g5764 LOC107453749 0
LOC107453754 Ptep1.0/2.0 NW_024970156.1 176030 202875 + E3 ubiquitin-protein ligase synoviolin aug3.g5763 LOC107453754 0
LOC107453748 Ptep1.0/2.0 NW_024970156.1 206394 220943 - TOG array regulator of axonemal microtubules protein 1 aug3.g5762 LOC107453748 0
LOC107453753 Ptep1.0/2.0 NW_024970156.1 266097 276881 - TOG array regulator of axonemal microtubules protein 1-like aug3.g5762 LOC107453753 0
LOC107453763 Ptep1.0/2.0 NW_024970156.1 277045 288723 + tryptophan--tRNA ligase, cytoplasmic aug3.g5761 LOC107453763 0
LOC107453765 Ptep1.0/2.0 NW_024970156.1 293692 313275 + putative polypeptide N-acetylgalactosaminyltransferase 10 aug3.g5760 LOC107453765 0
LOC107443915 Ptep1.0/2.0 NW_024970165.1 693658 744958 + V-type proton ATPase subunit B aug3.g576 LOC107443915 0
LOC122273305 Ptep1.0/2.0 NW_024975319.1 3353 4023 + uncharacterized LOC122273305 aug3.g5765 LOC107453761 1e-70
14 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02