Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107443984 Ptep1.0/2.0 NW_024969708.1 268916 288036 - aquaporin AQPAe.a-like aug3.g602 LOC107443984 0
LOC122269073 Ptep1.0/2.0 NW_024969730.1 424177 424788 - uncharacterized LOC122269073 aug3.g2634,aug3.g6026,aug3.g1413 NA 0
LOC107443167 Ptep1.0/2.0 NW_024969910.1 155334 156461 - uncharacterized LOC107443167 aug3.g27863,aug3.g6023,aug3.g13969 LOC107443167 0
LOC107436246 Ptep1.0/2.0 NW_024970369.1 228242 231302 - uncharacterized protein K02A2.6-like aug3.g2679,aug3.g14204,aug3.g6022,aug3.g8402,aug3.g25985 LOC107436246 0
LOC122271181 Ptep1.0/2.0 NW_024970626.1 263618 266246 + uncharacterized LOC122271181 aug3.g6020 NA 0.000000000000006
LOC107454085 Ptep1.0/2.0 NW_025029441.1 20961 49641 - 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 3 aug3.g6021 LOC107454085 0
LOC107454078 Ptep1.0/2.0 NW_025029441.1 64889 67654 - uncharacterized protein K02A2.6-like aug3.g6022,aug3.g20381 LOC107454078 0
LOC107454079 Ptep1.0/2.0 NW_025029441.1 84350 85579 + uncharacterized LOC107454079 aug3.g6023 LOC107454079 0
LOC107454094 Ptep1.0/2.0 NW_025029441.1 99252 139267 + insulin-like growth factor-binding protein complex acid labile subunit aug3.g6024 LOC107454094 0
LOC107454074 Ptep1.0/2.0 NW_025029441.1 140206 203294 - CRISP/Allergen/PR-1 aug3.g6025 LOC107454074 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02