Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107441973 Ptep1.0/2.0 NW_024969641.1 2705159 2705852 + ubiquitin-conjugating enzyme E2 J2-like aug3.g7290,aug3.g24423 LOC107441973 0
LOC122269291 Ptep1.0/2.0 NW_024969782.1 40293 88511 + uncharacterized LOC122269291 aug3.g729 NA 1e-24
LOC107442616 Ptep1.0/2.0 NW_024971116.1 10627 53592 - uncharacterized LOC107442616 aug3.g7296,aug3.g7294 LOC107442616 0
LOC107442614 Ptep1.0/2.0 NW_024971116.1 58701 96948 + protein O-GlcNAcase aug3.g7299 LOC107442614 0
LOC107444484 Ptep1.0/2.0 NW_024971956.1 31500 37480 - cubilin-like aug3.g729 LOC107444484 0
LOC107444493 Ptep1.0/2.0 NW_024971956.1 58521 112197 - cubilin homolog aug3.g729,aug3.g22496 LOC107444493 0
LOC107447917 Ptep1.0/2.0 NW_024972806.1 40859 73519 - polyphosphoinositide phosphatase aug3.g20059,aug3.g7291 LOC107447917,LOC107442606 0
LOC107442607 Ptep1.0/2.0 NW_024972806.1 80178 81392 - gastrula zinc finger protein XlCGF46.1 aug3.g7292 LOC107442607 0
LOC107442620 Ptep1.0/2.0 NW_024972806.1 98594 105431 - uncharacterized LOC107442620 aug3.g7294 LOC107442620 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02