Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107442619 Ptep1.0/2.0 NW_024969788.1 582291 665829 - gamma-aminobutyric acid receptor subunit beta-like aug3.g7308 LOC107442619 0
LOC107442621 Ptep1.0/2.0 NW_024969788.1 687046 744228 + gamma-aminobutyric acid receptor subunit alpha-6-like aug3.g7307 LOC107442621 0
LOC107442618 Ptep1.0/2.0 NW_024969788.1 748658 808851 + syntaxin-binding protein 5 aug3.g7306 LOC107442618 0
LOC107442622 Ptep1.0/2.0 NW_024969788.1 823525 825728 - muscarinic acetylcholine receptor M1-like aug3.g7305 LOC107442622 0
LOC122269323 Ptep1.0/2.0 NW_024969788.1 889398 1043333 - uncharacterized LOC122269323 aug3.g7305 NA 0
LOC122269688 Ptep1.0/2.0 NW_024969897.1 317602 320208 + uncharacterized LOC122269688 aug3.g25985,aug3.g7301 NA 0
LOC107442608 Ptep1.0/2.0 NW_024971116.1 111170 118051 + 40S ribosomal protein S23 aug3.g7300 LOC107442608 2e-154
LOC107444492 Ptep1.0/2.0 NW_024971956.1 11969 26006 + multifunctional methyltransferase subunit TRM112-like protein aug3.g730 LOC107444492 0
8 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02