Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC122268988 Ptep1.0/2.0 NW_024969602.1 818241 821390 + uncharacterized LOC122268988 aug3.g732 NA 2e-80
LOC107444489 Ptep1.0/2.0 NW_024969681.1 1435722 1446134 - protein regulator of cytokinesis 1 aug3.g732 LOC107444489 0
LOC107443095 Ptep1.0/2.0 NW_024970066.1 405293 407408 - uncharacterized LOC107443095 aug3.g7329 LOC107443095 0
LOC107443092 Ptep1.0/2.0 NW_024970066.1 419236 440883 - uncharacterized LOC107443092 aug3.g7327 LOC107443092 0
LOC107443094 Ptep1.0/2.0 NW_024970066.1 453843 455928 - TD and POZ domain-containing protein 4 aug3.g7326 LOC107443094 0
LOC107443072 Ptep1.0/2.0 NW_024970066.1 463589 464665 + TD and POZ domain-containing protein 3 aug3.g7325,aug3.g21007 LOC107443072 0
LOC107443070 Ptep1.0/2.0 NW_024970066.1 504384 607849 - neprilysin-2 aug3.g7323 LOC107443070 0
LOC122270139 Ptep1.0/2.0 NW_024970066.1 638503 643351 - uncharacterized LOC122270139 aug3.g7322 NA 1e-46
LOC107443090 Ptep1.0/2.0 NW_024970066.1 650725 656259 - uncharacterized LOC107443090 aug3.g7321 LOC107443090 3e-93
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02