Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107455569 Ptep1.0/2.0 NW_024969820.1 984459 1011982 + UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like protein 1 aug3.g7879 LOC107455569 0
LOC107455581 Ptep1.0/2.0 NW_024969820.1 1017167 1017990 + 60S ribosomal protein L9 aug3.g7878 LOC107455581 0
LOC107455577 Ptep1.0/2.0 NW_024969820.1 1032458 1056619 + cytochrome P450 2C15 aug3.g7876 LOC107455577 0
LOC107455579 Ptep1.0/2.0 NW_024969820.1 1033089 1035284 + von Hippel-Lindau disease tumor suppressor aug3.g7877 LOC107455579 0
LOC107455582 Ptep1.0/2.0 NW_024969820.1 1067853 1111802 - uncharacterized LOC107455582 aug3.g7875 LOC107455582 0
LOC107455575 Ptep1.0/2.0 NW_024969820.1 1126649 1175204 - glutaminase liver isoform, mitochondrial aug3.g7873 LOC107455575 0
LOC107455576 Ptep1.0/2.0 NW_024969820.1 1175615 1182354 + uncharacterized protein PF11_0213-like aug3.g7872 LOC107455576 0
LOC107455573 Ptep1.0/2.0 NW_024969820.1 1195275 1228680 - epsin-2 aug3.g7871 LOC107455573 0
LOC107455574 Ptep1.0/2.0 NW_024969820.1 1228971 1234611 + 7,8-dihydro-8-oxoguanine triphosphatase aug3.g7870 LOC107455574 0
LOC107451746 Ptep1.0/2.0 NW_024970311.1 258668 270499 - protein FAM136A-like aug3.g787 LOC107451746 4e-180
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02