Pt_spiderBASE v3

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]

Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107456834 Ptep1.0/2.0 NW_024969653.1 155970 175712 + 26S proteasome non-ATPase regulatory subunit 11 aug3.g8860 LOC107456834 0
LOC107456824 Ptep1.0/2.0 NW_024969653.1 185814 214537 + dorsalin-1-like aug3.g8860 LOC107456824 0
LOC107456826 Ptep1.0/2.0 NW_024969653.1 268460 274876 + zinc finger protein SNAI2 aug3.g8862,aug3.g24175 LOC107456826 0
LOC107456825 Ptep1.0/2.0 NW_024969653.1 346336 366332 + SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 aug3.g8863 LOC107456825 0
LOC107456828 Ptep1.0/2.0 NW_024969653.1 368093 385346 - COP9 signalosome complex subunit 4 aug3.g8864 LOC107456828 0
LOC107456827 Ptep1.0/2.0 NW_024969653.1 385459 423023 + protein lin-54 homolog aug3.g8865 LOC107456827 0
LOC107456831 Ptep1.0/2.0 NW_024969653.1 428979 437897 + RNA-binding protein squid aug3.g8866,aug3.g19381 LOC107446789,LOC107456831 0
LOC107444955 Ptep1.0/2.0 NW_024969713.1 1085101 1212180 - uncharacterized LOC107444955 aug3.g887,aug3.g886 LOC107444955 0
LOC107454042 Ptep1.0/2.0 NW_024969902.1 758045 766732 - uncharacterized LOC107454042 aug3.g8869 LOC107454042 3e-107
LOC122269920 Ptep1.0/2.0 NW_024969986.1 863774 887828 + uncharacterized LOC122269920 aug3.g8869 NA 0
LOC107455252 Ptep1.0/2.0 NW_024971555.1 4162 43837 - uncharacterized LOC107455252 aug3.g8869 LOC107455252 3e-87
LOC107456839 Ptep1.0/2.0 NW_024971555.1 56680 58294 + probable glutamate receptor aug3.g8868 LOC107456839 0
12 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]
Last updated by Hiroki Oda, 2022.11.02