Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC122269415 Ptep1.0/2.0 NW_024969812.1 1020488 1026125 - carnosic acid synthase-like aug3.g9090 NA 2e-164
LOC107457107 Ptep1.0/2.0 NW_024969920.1 2829950 2839751 + uncharacterized LOC107457107 aug3.g9099 LOC107457107 0
LOC107457110 Ptep1.0/2.0 NW_024969920.1 2847957 2878609 - prostaglandin reductase 3 aug3.g9097 LOC107457110 0
LOC107457101 Ptep1.0/2.0 NW_024969920.1 2884298 2907225 - prostaglandin reductase 3 aug3.g9096 LOC107457101 0
LOC107457100 Ptep1.0/2.0 NW_024969920.1 2915764 3000783 - putative ferric-chelate reductase 1 homolog aug3.g9095 LOC107457100 0
LOC107457098 Ptep1.0/2.0 NW_024969920.1 3007238 3014315 - tRNA wybutosine-synthesizing protein 3 homolog aug3.g9094 LOC107457098 0
LOC107457102 Ptep1.0/2.0 NW_024969920.1 3020085 3025078 - uncharacterized LOC107457102 aug3.g9093 LOC107457102 0
LOC107457103 Ptep1.0/2.0 NW_024969920.1 3025077 3030626 + protein Dr1 aug3.g9092 LOC107457103 0
LOC107457111 Ptep1.0/2.0 NW_024969920.1 3037127 3052039 - uncharacterized HTH-type transcriptional regulator YdfD aug3.g9091 LOC107457111 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02