Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107457148 Ptep1.0/2.0 NW_024969699.1 428499 433835 + uncharacterized LOC107457148 aug3.g9120 LOC107457148 0
LOC107457149 Ptep1.0/2.0 NW_024969699.1 442646 444443 - protoporphyrinogen oxidase aug3.g9121 LOC107457149 0
LOC107457147 Ptep1.0/2.0 NW_024969699.1 444722 447264 + histone-lysine N-methyltransferase SUV39H2 aug3.g9122 LOC107457147 0
LOC107457146 Ptep1.0/2.0 NW_024969699.1 464108 495468 - uncharacterized LOC107457146 aug3.g9123 LOC107457146 0
LOC107457145 Ptep1.0/2.0 NW_024969699.1 505479 514486 - adenosylhomocysteinase A aug3.g9124 LOC107457145 0
LOC107457152 Ptep1.0/2.0 NW_024969898.1 6398645 6431930 + arylsulfatase B-like aug3.g9128,aug3.g9129 LOC107457152 0
LOC107457162 Ptep1.0/2.0 NW_024969898.1 6438011 6455270 - arylsulfatase B aug3.g9127 LOC107457162 0
LOC107457163 Ptep1.0/2.0 NW_024969898.1 6461779 6486282 - arylsulfatase I aug3.g9126 LOC107457163 0
LOC107449551 Ptep1.0/2.0 NW_024969898.1 6473484 6505137 + probable cytochrome P450 49a1 aug3.g20812,aug3.g9125 LOC107449551 0
LOC107445071 Ptep1.0/2.0 NW_024970501.1 77823 104331 + putative sodium-coupled neutral amino acid transporter 7 aug3.g912 LOC107445071 0
LOC110283020 Ptep1.0/2.0 NW_024998082.1 377 754 + putative sodium-coupled neutral amino acid transporter 7 aug3.g912 LOC110283020 9e-138
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02