Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107445694 Ptep1.0/2.0 NW_024969911.1 448052 571614 + unconventional myosin-Vb aug3.g9254,aug3.g6148,aug3.g21618 LOC107445694 0
LOC110283356 Ptep1.0/2.0 NW_024969911.1 717763 719754 + proteoglycan 4 aug3.g9253 LOC110283356 0
LOC122269738 Ptep1.0/2.0 NW_024969911.1 729061 730489 + uncharacterized LOC122269738 aug3.g9252 NA 0
LOC110283362 Ptep1.0/2.0 NW_024969911.1 745604 752165 + spidroin-2-like aug3.g9250 LOC110283362 0
LOC107446240 Ptep1.0/2.0 NW_024970317.1 154444 169710 + carboxypeptidase B-like aug3.g9257,aug3.g24446 LOC107446240 0
LOC107446156 Ptep1.0/2.0 NW_024970317.1 263723 292678 - GTP-binding protein RAD-like aug3.g9256 LOC107446156 0
LOC107445094 Ptep1.0/2.0 NW_024970731.1 25202 55554 + eukaryotic translation initiation factor 5B aug3.g925 LOC107445094 0
LOC107446077 Ptep1.0/2.0 NW_024997829.1 48 1099 + proline-rich receptor-like protein kinase PERK10 aug3.g9253 LOC107446077 0
8 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02