Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107445096 Ptep1.0/2.0 NW_024969893.1 243023 245494 - uncharacterized LOC107445096 aug3.g940 LOC107445096 0
LOC107436286 Ptep1.0/2.0 NW_024970149.1 427211 428398 + TD and POZ domain-containing protein 4-like aug3.g9400 LOC107436286 0
LOC107436295 Ptep1.0/2.0 NW_024970149.1 432765 434198 + speckle-type POZ protein B-like aug3.g19668,aug3.g9408,aug3.g19670 LOC107436295 0
LOC107436225 Ptep1.0/2.0 NW_024970149.1 452954 458976 + speckle-type POZ protein-like A aug3.g9402 LOC107436225 0
LOC107436303 Ptep1.0/2.0 NW_024970149.1 468706 516491 + speckle-type POZ protein B-like aug3.g9406,aug3.g19669,aug3.g9413,aug3.g19673,aug3.g19674,aug3.g19672,aug3.g9410,aug3.g9407,aug3.g9405,aug3.g19671,aug3.g9403,aug3.g9409,aug3.g9412 LOC107436303 0
LOC122270361 Ptep1.0/2.0 NW_024970149.1 481096 481482 + speckle-type POZ protein B-like aug3.g9409 NA 4e-149
LOC110283334 Ptep1.0/2.0 NW_024970149.1 491810 492211 + speckle-type POZ protein-like B aug3.g9403 LOC110283334 4e-94
LOC122268249 Ptep1.0/2.0 NW_024973096.1 9857 12420 + TD and POZ domain-containing protein 4-like aug3.g9409 NA 0
LOC122268237 Ptep1.0/2.0 NW_024983184.1 68 910 + speckle-type POZ protein B-like aug3.g9403 LOC107436303 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02