Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107439497 Ptep1.0/2.0 NW_024969670.1 1247996 1252828 - uncharacterized LOC107439497 aug3.g9662 LOC107439497 0
LOC107439486 Ptep1.0/2.0 NW_024969670.1 1258981 1266300 + uncharacterized LOC107439486 aug3.g9661 LOC107439486 0
LOC107439472 Ptep1.0/2.0 NW_024969670.1 1265766 1276824 - protein wos2 aug3.g9660 LOC107439472 0
LOC107439594 Ptep1.0/2.0 NW_024969687.1 2303970 2313624 - protein ABHD14B aug3.g9670,aug3.g9669 LOC107439594 0
LOC107439534 Ptep1.0/2.0 NW_024969687.1 2313733 2334000 + GATOR complex protein NPRL2 aug3.g9668 LOC107439534 0
LOC107439587 Ptep1.0/2.0 NW_024969687.1 2340874 2351318 + sulfotransferase ssu-1-like aug3.g9667 LOC107439587 0
LOC107439523 Ptep1.0/2.0 NW_024969687.1 2352658 2362838 - N(6)-adenine-specific methyltransferase METTL4 aug3.g9666 LOC107439523 0
LOC107439567 Ptep1.0/2.0 NW_024969687.1 2378955 2401354 - proton-coupled folate transporter aug3.g9665 LOC107439567 0
LOC107439558 Ptep1.0/2.0 NW_024969687.1 2414500 2428211 - proton-coupled folate transporter aug3.g9664 LOC107439558 0
LOC107439550 Ptep1.0/2.0 NW_024969687.1 2432379 2455500 - solute carrier family 46 member 3 aug3.g9663 LOC107439550 0
LOC122272942 Ptep1.0/2.0 NW_024973416.1 1192 10724 - uncharacterized LOC122272942 aug3.g966 NA 4e-48
LOC122272961 Ptep1.0/2.0 NW_024973498.1 1749 8051 + uncharacterized LOC122272961 aug3.g966 NA 6e-51
LOC107445194 Ptep1.0/2.0 NW_024973498.1 1753 3923 - uncharacterized LOC107445194 aug3.g966 LOC107445194 5e-50
LOC122273347 Ptep1.0/2.0 NW_024975605.1 680 3976 + uncharacterized LOC122273347 aug3.g966 NA 2e-43
14 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02