Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC122270545 Ptep1.0/2.0 NW_024969627.1 456210 568914 - uncharacterized LOC122270545 aug3.g9839 NA 1e-42
LOC107441522 Ptep1.0/2.0 NW_024969627.1 468509 577338 + calcium-activated potassium channel slowpoke aug3.g9839 LOC107441522 0
LOC107441512 Ptep1.0/2.0 NW_024969627.1 614673 649690 + U-scoloptoxin(05)-Sm1a aug3.g9837 LOC107441512 0
LOC107441450 Ptep1.0/2.0 NW_024969627.1 654696 743171 - proto-oncogene tyrosine-protein kinase ROS aug3.g9836,aug3.g22581 LOC107441450 0
LOC107441477 Ptep1.0/2.0 NW_024969627.1 752871 777207 - NFX1-type zinc finger-containing protein 1 aug3.g9835 LOC107441477 0
LOC107441502 Ptep1.0/2.0 NW_024969627.1 776518 777240 + hydroxyacylglutathione hydrolase, mitochondrial-like aug3.g9834 LOC107441502 0
LOC107441457 Ptep1.0/2.0 NW_024969627.1 780149 780958 - AP-5 complex subunit sigma-1 aug3.g9833 LOC107441457 0
LOC107441464 Ptep1.0/2.0 NW_024969627.1 781141 809423 + SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A aug3.g9832 LOC107441464 0
LOC107441421 Ptep1.0/2.0 NW_024969770.1 1650229 1683775 - membrane-bound transcription factor site-2 protease aug3.g9831 LOC107441421 0
LOC107445247 Ptep1.0/2.0 NW_024969803.1 167942 176618 - 40S ribosomal protein S24 aug3.g983 LOC107445247 0
LOC122270019 Ptep1.0/2.0 NW_024970015.1 434235 435782 - uncharacterized protein K02A2.6-like aug3.g18427,aug3.g3915,aug3.g9830,aug3.g22133,aug3.g18428,aug3.g19542,aug3.g10561,aug3.g17321 NA 0
LOC122272661 Ptep1.0/2.0 NW_024972478.1 24971 25475 - uncharacterized LOC122272661 aug3.g983 LOC107445247 6e-48
12 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02