Pt_spiderBASE v3

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]

Evolutionary characterization of Ptep genes by reciprocal blasting against ncbi datasets of selected organisms

Gene/Transcript Records
NCBI geneIDProtein ACC (-> NCBI)ProductSynonymsGene typeOrganismTop hit RNA ACCE-valueTop hit geneIDTop hit geneID descriptionTop hit synonymsReciprocal blastIdentity
LOC107451809 NP_001310756.1 sonic hedgehog protein-like hh,hedgehog PROTEIN_CODING Scer_559292 NM_001183918.1 1.8 856000 aspartate--tRNA ligase MSD1 LPG5 107446936 different
LOC107451809 NP_001310756.1 sonic hedgehog protein-like hh,hedgehog PROTEIN_CODING Atha_3702 NM_124583.4 8.2 835279 RNA-binding (RRM/RBD/RNP motifs) family protein ARGININE/SERINE-RICH SPLICING FACTOR,arginine/serine-rich splicing factor 41,At-RS41,ATRSP41,MSG15.12,MSG15_12 107438683 different
LOC107451809 NP_001310756.1 sonic hedgehog protein-like hh,hedgehog PROTEIN_CODING Mbre_431895 XM_001748931.1 1.22e-05 5894225 hypothetical protein 107451809 identical
LOC107451809 NP_001310756.1 sonic hedgehog protein-like hh,hedgehog PROTEIN_CODING Aque_400682 XM_011410975.2 4.98e-33 105316164 indian hedgehog protein-like 107451809 identical
LOC107451809 NP_001310756.1 sonic hedgehog protein-like hh,hedgehog PROTEIN_CODING Nvec_45351 XM_048724087.1 1.14e-87 5515501 indian hedgehog protein hedgehog1 107451809 identical
LOC107451809 NP_001310756.1 sonic hedgehog protein-like hh,hedgehog PROTEIN_CODING Spur_7668 NM_001012702.1 7.77e-109 373331 hedgehog 107451809 identical
LOC107451809 NP_001310756.1 sonic hedgehog protein-like hh,hedgehog PROTEIN_CODING Arub_7604 XM_033769227.1 1.60e-107 117288384 indian hedgehog protein-like 107451809 identical
LOC107451809 NP_001310756.1 sonic hedgehog protein-like hh,hedgehog PROTEIN_CODING Skow_10224 XM_002740152.3 3.83e-126 100303518 hedgehog 107451809 identical
LOC107451809 NP_001310756.1 sonic hedgehog protein-like hh,hedgehog PROTEIN_CODING Bflo_7739 XM_035801797.1 1.81e-106 118403211 sonic hedgehog protein A-like 107451809 identical
LOC107451809 NP_001310756.1 sonic hedgehog protein-like hh,hedgehog PROTEIN_CODING Mmus_10090 NM_010544.3 2.55e-120 16147 Indian hedgehog HHG-2 107451809 identical
LOC107451809 NP_001310756.1 sonic hedgehog protein-like hh,hedgehog PROTEIN_CODING Pmax_6579 XM_033872244.1 3.11e-118 117317425 sonic hedgehog protein A-like 107451809 identical
LOC107451809 NP_001310756.1 sonic hedgehog protein-like hh,hedgehog PROTEIN_CODING Dmel_7227 NM_001038976.1 5.22e-113 42737 hedgehog anon-WO0134654.19,anon-WO0182946.19,bar,bar-3,bar3,CG4637,Dmel\CG4637,Dmhh,hg,Hg,Hh,HH,l(3)hh,l(3)neo56,l(3)neo57,Mir,Mrt 107451809 identical
LOC107451809 NP_001310756.1 sonic hedgehog protein-like hh,hedgehog PROTEIN_CODING Tcas_7070 NM_001114365.1 3.89e-138 655104 hedgehog 107451809 identical
LOC107451809 NP_001310756.1 sonic hedgehog protein-like hh,hedgehog PROTEIN_CODING Dmag_35525 XM_045169874.1 2.63e-134 116917249 sonic hedgehog protein A hh 107451809 identical
LOC107451809 NP_001310756.1 sonic hedgehog protein-like hh,hedgehog PROTEIN_CODING Eaff_88015 XM_023470926.1 7.24e-137 111700107 indian hedgehog protein-like 107451809 identical
LOC107451809 NP_001310756.1 sonic hedgehog protein-like hh,hedgehog PROTEIN_CODING Hazt_294128 XM_018155290.2 1.92e-109 108668134 desert hedgehog protein A-like 107451809 identical
LOC107451809 NP_001310756.1 sonic hedgehog protein-like hh,hedgehog PROTEIN_CODING Pmon_6687 XM_037943907.1 1.29e-134 119594816 indian hedgehog protein-like 107451809 identical
LOC107451809 NP_001310756.1 sonic hedgehog protein-like hh,hedgehog PROTEIN_CODING Lpol_6850 XM_013939206.2 5.04e-155 106478649 sonic hedgehog protein A-like 107451809 identical
LOC107451809 NP_001310756.1 sonic hedgehog protein-like hh,hedgehog PROTEIN_CODING Cscu_218467 XM_023360697.1 1.03e-155 111619054 sonic hedgehog protein A-like 107451809 identical
LOC107451809 NP_001310756.1 sonic hedgehog protein-like hh,hedgehog PROTEIN_CODING Sdum_202533 XM_035369284.1 1.04e-130 118197743 sonic hedgehog protein A-like 107451809 identical
LOC107451809 NP_001310756.1 sonic hedgehog protein-like hh,hedgehog PROTEIN_CODING Ptep_114398 NM_001323827.1 0.0 107451809 sonic hedgehog protein-like hh,hedgehog 107451809 identical
21 records associated with 1 genes were found.(Max.=1000)

Enter a list of words (100 or less) delimited by "," (LOC107451809,LOC107447678,LOC107457189)
Field: find:
E-value: Threshold to highlight:
[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]
Last updated by hiroki oda, 2023.5.14