Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107445403 Ptep1.0/2.0 NW_024969696.1 918487 932609 + polycomb group RING finger protein 1 aug3.g1041 LOC107445411,LOC107445403 0
LOC122269338 Ptep1.0/2.0 NW_024969791.1 272650 273021 + uncharacterized LOC122269338 aug3.g16367,aug3.g26851,aug3.g18653,aug3.g15757,aug3.g14342,aug3.g23728,aug3.g11654,aug3.g25539,aug3.g17572,aug3.g12129,aug3.g16760,aug3.g10418,aug3.g1935 NA 0
LOC107449049 Ptep1.0/2.0 NW_024970044.1 185012 206484 + cytochrome P450 2F2 aug3.g10419 LOC107449049 0
LOC122270721 Ptep1.0/2.0 NW_024970330.1 4321 4692 - uncharacterized LOC122270721 aug3.g10418 NA 0
LOC107449031 Ptep1.0/2.0 NW_024970330.1 5973 23276 + cytochrome P450 2J6-like aug3.g10417,aug3.g10419,aug3.g10421 LOC107449031 0
LOC107449022 Ptep1.0/2.0 NW_024970330.1 59440 82565 + cytochrome P450 2U1-like aug3.g10415 LOC107449022 0
LOC107448862 Ptep1.0/2.0 NW_024970330.1 96501 128847 + uncharacterized LOC107448862 aug3.g10414 LOC107448862 0
LOC107449004 Ptep1.0/2.0 NW_024970330.1 131936 153944 + pancreatic lipase-related protein 2-like aug3.g10414 LOC107449004 0
LOC107449013 Ptep1.0/2.0 NW_024970330.1 153935 160345 - beclin-1 aug3.g10413 LOC107449013 0
LOC107448967 Ptep1.0/2.0 NW_024970330.1 165410 168833 - uncharacterized LOC107448967 aug3.g10412 LOC107448967 0
LOC107448977 Ptep1.0/2.0 NW_024970330.1 168748 186801 + 1-acylglycerol-3-phosphate O-acyltransferase ABHD5 aug3.g10411 LOC107448977 0
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02