Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107446990 Ptep1.0/2.0 NW_024969684.1 1221620 1594117 - zinc finger E-box-binding homeobox 2 aug3.g19505,aug3.g10715 LOC107446990 0
LOC107448003 Ptep1.0/2.0 NW_024969855.1 15742 63415 + actin cytoskeleton-regulatory complex protein PAN1 aug3.g20081,aug3.g10711 LOC107448003 0
LOC107453283 Ptep1.0/2.0 NW_024969959.1 626630 710098 + uncharacterized LOC107453283 aug3.g10718,aug3.g10719 LOC107453283 0
LOC107453301 Ptep1.0/2.0 NW_024969959.1 712384 758145 - CWF19-like protein 1 aug3.g10716 LOC107453301 0
LOC122270033 Ptep1.0/2.0 NW_024970023.1 699902 709940 - uncharacterized LOC122270033 aug3.g10713 NA 0
LOC122270372 Ptep1.0/2.0 NW_024970152.1 431657 436540 + tigger transposable element-derived protein 6-like aug3.g10717 NA 2e-123
LOC122270373 Ptep1.0/2.0 NW_024970152.1 436090 437458 - uncharacterized LOC122270373 aug3.g10717 NA 1e-79
LOC107442687 Ptep1.0/2.0 NW_024970927.1 43320 83057 - uncharacterized LOC107442687 aug3.g16749,aug3.g10713,aug3.g16750,aug3.g22035 LOC107442687 0
LOC107457120 Ptep1.0/2.0 NW_024971003.1 231224 234064 - tigger transposable element-derived protein 6-like aug3.g18287,aug3.g10717 LOC107457120 0
LOC107445533 Ptep1.0/2.0 NW_024971615.1 54804 68239 - integrator complex subunit 5 aug3.g1071 LOC107445533 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02