Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107453262 Ptep1.0/2.0 NW_024969959.1 14577 24818 + glycerophosphocholine cholinephosphodiesterase ENPP6-like aug3.g10728 LOC107453262 0
LOC107453345 Ptep1.0/2.0 NW_024969959.1 39912 386398 - sodium bicarbonate transporter-like protein 11 aug3.g10726 LOC107453345 0
LOC107453328 Ptep1.0/2.0 NW_024969959.1 429501 444192 + mitochondrial import inner membrane translocase subunit Tim21 aug3.g10724 LOC107453328 0
LOC107453316 Ptep1.0/2.0 NW_024969959.1 460102 494149 + tyrosine-protein phosphatase non-receptor type 1 aug3.g10723 LOC107453316 0
LOC107453251 Ptep1.0/2.0 NW_024969959.1 506686 516895 + uncharacterized LOC107453251 aug3.g10722 LOC107453251 0
LOC107453274 Ptep1.0/2.0 NW_024969959.1 548040 631374 - glucose transporter type 1-like aug3.g10720 LOC107453274 0
LOC107445529 Ptep1.0/2.0 NW_024970431.1 9680 63668 - cysteine protease ATG4B aug3.g1072 LOC107445529 0
LOC107453554 Ptep1.0/2.0 NW_024971537.1 11676 14888 + uncharacterized LOC107453554 aug3.g10729 LOC107453554 7e-97
LOC107453546 Ptep1.0/2.0 NW_024971537.1 17301 42930 + uncharacterized LOC107453546 aug3.g10729 LOC107453546 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02