Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107445569 Ptep1.0/2.0 NW_024969790.1 139902 149711 - uncharacterized LOC107445569 aug3.g1082 LOC107445569 0
LOC107445992 Ptep1.0/2.0 NW_024970176.1 451827 488308 + ATP-dependent 6-phosphofructokinase aug3.g18871,aug3.g20211,aug3.g10826 LOC107445992 0
LOC107454797 Ptep1.0/2.0 NW_024970214.1 11219 20961 + uncharacterized LOC107454797 aug3.g10822 LOC107454797 0
LOC107454784 Ptep1.0/2.0 NW_024970214.1 48326 73435 - myosin-9-like aug3.g10821,aug3.g16727 LOC107454784 0
LOC122271146 Ptep1.0/2.0 NW_024970597.1 5964 11852 + speckle-type POZ protein B-like aug3.g10824 NA 0
LOC107454815 Ptep1.0/2.0 NW_024970597.1 13351 35841 - syntaxin-5 aug3.g10825 LOC107454815 0
LOC107454835 Ptep1.0/2.0 NW_024970597.1 46016 83768 - ATP-dependent 6-phosphofructokinase aug3.g10826 LOC107454835,LOC107454997 0
LOC107454826 Ptep1.0/2.0 NW_024970597.1 83854 134221 + integrator complex subunit 8 aug3.g10827,aug3.g10829,aug3.g10828 LOC110281944,LOC107454826 0
8 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02