Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107452235 Ptep1.0/2.0 NW_024969762.1 485630 490881 + uncharacterized LOC107452235 aug3.g4617,aug3.g10833 LOC107452235 0
LOC107445588 Ptep1.0/2.0 NW_024969790.1 1705 35377 - tyrosine aminotransferase-like aug3.g1083 LOC107445588 0
LOC122270473 Ptep1.0/2.0 NW_024970198.1 515878 523913 - tyrosine aminotransferase-like aug3.g1083 LOC107445588 0
LOC107454846 Ptep1.0/2.0 NW_024970597.1 135149 243858 - RNA-binding protein fusilli aug3.g10830 LOC107454846 0
LOC107454864 Ptep1.0/2.0 NW_024970597.1 265956 286010 - enolase-phosphatase E1 aug3.g10831 LOC107454864 0
LOC107454942 Ptep1.0/2.0 NW_024970756.1 86732 99463 - uncharacterized LOC107454942 aug3.g10839 LOC107454942 0
LOC107454934 Ptep1.0/2.0 NW_024970756.1 109586 111194 - uncharacterized protein C7orf26 homolog aug3.g10837 LOC107454934 0
LOC107454920 Ptep1.0/2.0 NW_024970756.1 111360 138455 + anoctamin-8 aug3.g10836 LOC107454920 0
LOC107454912 Ptep1.0/2.0 NW_024970756.1 148544 176071 - furin-like protease 1, isoforms 1/1-X/2 aug3.g10835 LOC107454912 0
LOC107454902 Ptep1.0/2.0 NW_024970756.1 183284 217766 + ATP-binding cassette sub-family D member 2 aug3.g10834 LOC107454902 0
LOC107454892 Ptep1.0/2.0 NW_024970756.1 220492 226525 - uncharacterized LOC107454892 aug3.g10833 LOC107454892 0
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02