Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC122268977 Ptep1.0/2.0 NW_024969601.1 1296308 1298821 + uncharacterized LOC122268977 aug3.g10934 NA 0
LOC107444877 Ptep1.0/2.0 NW_024969601.1 1298873 1301017 + uncharacterized LOC107444877 aug3.g10934,aug3.g2573 LOC107444877 0
LOC107437761 Ptep1.0/2.0 NW_024969975.1 466465 467922 - uncharacterized LOC107437761 aug3.g12560,aug3.g10934,aug3.g2369,aug3.g18156,aug3.g27665,aug3.g13554,aug3.g16210,aug3.g22807,aug3.g17498 LOC107437761 0
LOC107456104 Ptep1.0/2.0 NW_024970773.1 124949 140750 + uncharacterized LOC107456104 aug3.g10934,aug3.g18321 LOC107456104 0
LOC107455598 Ptep1.0/2.0 NW_024970773.1 145566 148270 + uncharacterized LOC107455598 aug3.g10934 LOC107455598 0
LOC122271600 Ptep1.0/2.0 NW_024970970.1 83293 84894 - uncharacterized LOC122271600 aug3.g10934 NA 0
LOC122273639 Ptep1.0/2.0 NW_024978002.1 689 3624 - uncharacterized LOC122273639 aug3.g10934 NA 0
7 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02