Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107457328 Ptep1.0/2.0 NW_024969625.1 1337844 1407805 + neurogenic differentiation factor 1-like aug3.g11084 LOC107457328 0
LOC107457327 Ptep1.0/2.0 NW_024969625.1 1451016 1517737 + uncharacterized LOC107457327 aug3.g11086 LOC107457327 0
LOC122270459 Ptep1.0/2.0 NW_024969625.1 1535349 1554974 + lutropin-choriogonadotropic hormone receptor-like aug3.g11086 LOC107457327 0
LOC107445920 Ptep1.0/2.0 NW_024969635.1 3248576 3307192 + myocyte-specific enhancer factor 2-like aug3.g110 LOC107445920 0
LOC107445635 Ptep1.0/2.0 NW_024969645.1 180228 185638 + lysine-specific histone demethylase 1B aug3.g1100 LOC107445635 0
LOC107445636 Ptep1.0/2.0 NW_024969645.1 189575 220240 + dynein axonemal intermediate chain 3 aug3.g1101,aug3.g21972 LOC107453631,LOC107445636 0
LOC107445633 Ptep1.0/2.0 NW_024969645.1 223912 245022 - peroxisomal acyl-coenzyme A oxidase 3 aug3.g1102 LOC107445633 0
LOC107445634 Ptep1.0/2.0 NW_024969645.1 245116 255169 + tRNA-splicing endonuclease subunit Sen34 aug3.g1103 LOC107445634 0
LOC107445632 Ptep1.0/2.0 NW_024969645.1 278082 301239 + peroxisomal acyl-coenzyme A oxidase 3 aug3.g1104 LOC107445632 0
LOC107445639 Ptep1.0/2.0 NW_024969645.1 303019 307414 - DNA replication complex GINS protein PSF2 aug3.g1105 LOC107445639 0
LOC107445628 Ptep1.0/2.0 NW_024969645.1 320181 536407 - TNF receptor-associated factor 4 aug3.g1107 LOC107445628 0
LOC107445637 Ptep1.0/2.0 NW_024969645.1 549214 583268 + putative RNA-binding protein EEED8.10 aug3.g1108 LOC107445637 0
LOC107445631 Ptep1.0/2.0 NW_024969645.1 592144 602772 - ras-related protein Rab-35 aug3.g1109 LOC107445631 0
LOC107457336 Ptep1.0/2.0 NW_024969652.1 481250 519874 - glutamate-rich protein 3 aug3.g11088 LOC107457336 0
LOC107457331 Ptep1.0/2.0 NW_024969652.1 542135 567804 + two pore potassium channel protein sup-9-like aug3.g11089 LOC107457331 0
LOC107457338 Ptep1.0/2.0 NW_024969652.1 619095 647409 - mitochondrial folate transporter/carrier aug3.g11091 LOC107457338 0
LOC107457339 Ptep1.0/2.0 NW_024969652.1 669616 715278 + putative ATP-dependent RNA helicase Pl10 aug3.g11094,aug3.g11095,aug3.g11093 LOC107457339,LOC107457340 0
LOC122272674 Ptep1.0/2.0 NW_024969652.1 716360 728570 - uncharacterized LOC122272674 aug3.g11095 NA 0
LOC107457308 Ptep1.0/2.0 NW_024969686.1 2141841 2170540 - calcium-activated chloride channel regulator 4A aug3.g20720,aug3.g11056 LOC107457308 0
LOC122268837 Ptep1.0/2.0 NW_024969686.1 2181027 2189222 + calcium-activated chloride channel regulator 3A-1-like aug3.g11057 LOC107457311 0
LOC107457311 Ptep1.0/2.0 NW_024969686.1 2190835 2228718 + calcium-activated chloride channel regulator 2 aug3.g11058,aug3.g11057 LOC107457311 0
LOC107457312 Ptep1.0/2.0 NW_024969686.1 2232661 2254674 - probable enoyl-CoA hydratase, mitochondrial aug3.g11059 LOC107457312 0
LOC107443943 Ptep1.0/2.0 NW_024969686.1 2366787 2607650 - brain-specific angiogenesis inhibitor 1-associated protein 2-like aug3.g11060,aug3.g24398 LOC107443943 0
LOC122269200 Ptep1.0/2.0 NW_024969758.1 818515 867630 - uncharacterized LOC122269200 aug3.g11035 LOC107453372 0.0000000005
LOC110282430 Ptep1.0/2.0 NW_024969758.1 884632 885237 + MFS-type transporter clz9-like aug3.g11033 LOC110282430 0
LOC107457255 Ptep1.0/2.0 NW_024969758.1 917251 939184 - high mobility group protein homolog TDP-1 aug3.g11031 LOC107457255 0
LOC107457257 Ptep1.0/2.0 NW_024969758.1 939343 954344 + sulfotransferase 1E1 aug3.g11030 LOC107457257 0
LOC107457256 Ptep1.0/2.0 NW_024969758.1 954350 1038542 - ETS homologous factor aug3.g11030,aug3.g11029 LOC107457256 0
LOC122269204 Ptep1.0/2.0 NW_024969758.1 1102169 1103606 - ankyrin repeat and SAM domain-containing protein 1A-like aug3.g11026 LOC107456879 0
LOC107457313 Ptep1.0/2.0 NW_024969787.1 743818 747270 - transcription factor Sox-2 aug3.g11061 LOC107457313 0
LOC110282747 Ptep1.0/2.0 NW_024969787.1 754722 809467 - uncharacterized LOC110282747 aug3.g11062 LOC110282747 0
LOC107457346 Ptep1.0/2.0 NW_024969819.1 1675160 1707931 - tyrosine-protein kinase JAK2 aug3.g11099 LOC107457346 0
LOC107457343 Ptep1.0/2.0 NW_024969819.1 1713548 1714393 + uncharacterized LOC107457343 aug3.g11098 LOC107457343 0
LOC107457341 Ptep1.0/2.0 NW_024969819.1 1728542 1817400 - sodium/potassium/calcium exchanger 2-like aug3.g11097 LOC107457341 0
LOC107457345 Ptep1.0/2.0 NW_024969819.1 1940479 1950702 - uncharacterized LOC107457345 aug3.g11096 LOC107457345 0
LOC107457290 Ptep1.0/2.0 NW_024969871.1 483989 593380 + homeobox protein slou aug3.g11040 LOC107457290 0
LOC107457286 Ptep1.0/2.0 NW_024969871.1 667662 681711 - ribose-5-phosphate isomerase aug3.g11039 LOC107457286 0
LOC107457289 Ptep1.0/2.0 NW_024969871.1 681942 700882 + rho GTPase-activating protein 19 aug3.g11038 LOC107457289 0
LOC107457288 Ptep1.0/2.0 NW_024969871.1 704627 720938 - leukocyte elastase inhibitor-like aug3.g11037 LOC107457288 0
LOC107457287 Ptep1.0/2.0 NW_024969871.1 727679 779447 + ras-related protein ced-10-like aug3.g14102,aug3.g23225,aug3.g11036,aug3.g14101 LOC107439402,LOC107457287 0
LOC107457243 Ptep1.0/2.0 NW_024969909.1 110141 237797 - protein Wnt-16-like aug3.g11009 LOC107457243 0
LOC107457242 Ptep1.0/2.0 NW_024969909.1 263781 280198 + integrator complex subunit 1 aug3.g11008 LOC107457242 0
LOC107457241 Ptep1.0/2.0 NW_024969909.1 290412 298807 + uncharacterized LOC107457241 aug3.g11007 LOC107457241 0
LOC107457239 Ptep1.0/2.0 NW_024969909.1 301531 312418 + uncharacterized LOC107457239 aug3.g11006 LOC107457239 0
LOC107457237 Ptep1.0/2.0 NW_024969909.1 364231 373446 - uncharacterized LOC107457237 aug3.g11005 LOC107457237 0
LOC107457236 Ptep1.0/2.0 NW_024969909.1 383693 396421 + uncharacterized LOC107457236 aug3.g11004 LOC107457236 0
LOC107437227 Ptep1.0/2.0 NW_024969939.1 1314 9548 + slit homolog 2 protein-like aug3.g12127,aug3.g18266,aug3.g11042 LOC107437227 0
LOC107437229 Ptep1.0/2.0 NW_024969939.1 59605 75099 + protein toll-like aug3.g12128,aug3.g18263,aug3.g23343,aug3.g25512,aug3.g11043 LOC107437229 0
LOC107457297 Ptep1.0/2.0 NW_024969939.1 124048 141910 + slit homolog 2 protein aug3.g11043 LOC107457297,LOC107443313 0
LOC107457298 Ptep1.0/2.0 NW_024969939.1 144025 170904 - dihydrolipoyl dehydrogenase, mitochondrial aug3.g11044 LOC107457298 0
LOC107457294 Ptep1.0/2.0 NW_024969939.1 171069 208784 + histone-lysine N-methyltransferase SETD1B aug3.g11045,aug3.g4438 LOC107457294,LOC107451976 0
LOC107457295 Ptep1.0/2.0 NW_024969939.1 225292 235777 + fructose-bisphosphate aldolase aug3.g11046 LOC107457295 0
LOC107457299 Ptep1.0/2.0 NW_024969939.1 240919 268482 - FACT complex subunit Ssrp1 aug3.g11047 LOC107457299 0
LOC107457296 Ptep1.0/2.0 NW_024969939.1 268628 292948 + DNA mismatch repair protein Mlh1 aug3.g11048 LOC107457296 0
LOC107457302 Ptep1.0/2.0 NW_024969939.1 292950 312973 - zinc finger-containing ubiquitin peptidase 1 aug3.g11049 LOC107457302 0
LOC107457301 Ptep1.0/2.0 NW_024969939.1 313079 360508 + TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 aug3.g11050 LOC107457301 0
LOC107457304 Ptep1.0/2.0 NW_024969939.1 367044 369080 - zinc finger protein 347 aug3.g11051 LOC107457304 0
LOC107457303 Ptep1.0/2.0 NW_024969939.1 369192 391278 + nucleoporin 88 aug3.g11052 LOC107457303 0
LOC107457305 Ptep1.0/2.0 NW_024969939.1 399104 417111 + heterogeneous nuclear ribonucleoprotein L aug3.g11054,aug3.g11053 LOC107457305 0
LOC122269803 Ptep1.0/2.0 NW_024969939.1 417137 424128 - uncharacterized LOC122269803 aug3.g11055 NA 1e-19
LOC122269802 Ptep1.0/2.0 NW_024969939.1 424140 424685 - uncharacterized LOC122269802 aug3.g11055 NA 0
LOC107456921 Ptep1.0/2.0 NW_024969987.1 460935 531977 + CD9 antigen aug3.g8947,aug3.g6589,aug3.g15183,aug3.g14221,aug3.g16461,aug3.g9719,aug3.g16641,aug3.g11079 LOC107456921 0
LOC107457250 Ptep1.0/2.0 NW_024970044.1 217272 226127 + uncharacterized LOC107457250 aug3.g11025 LOC107457250 0
LOC107457251 Ptep1.0/2.0 NW_024970044.1 231096 235923 + uncharacterized LOC107457251 aug3.g11025 LOC107457251 8e-136
LOC107457249 Ptep1.0/2.0 NW_024970044.1 252702 264581 + mitochondrial ribonuclease P protein 1 homolog aug3.g11024 LOC107457249 0
LOC107457248 Ptep1.0/2.0 NW_024970044.1 268075 308359 - next to BRCA1 gene 1 protein aug3.g11023 LOC107457248 0
LOC107457247 Ptep1.0/2.0 NW_024970044.1 371738 509260 + ecdysone-inducible protein E75 aug3.g11022 LOC107457247 0
LOC107457246 Ptep1.0/2.0 NW_024970044.1 584001 586129 + cytoplasmic protein NCK2-like aug3.g11021 LOC107457246 0
LOC107442161 Ptep1.0/2.0 NW_024970163.1 567911 574019 - uncharacterized LOC107442161 aug3.g3470,aug3.g13707,aug3.g11098,aug3.g9883 LOC107442161 0
LOC107451960 Ptep1.0/2.0 NW_024970267.1 149619 162084 + uncharacterized LOC107451960 aug3.g11016,aug3.g4434 LOC107451960 0
LOC122270594 Ptep1.0/2.0 NW_024970267.1 170192 175057 + uncharacterized LOC122270594 aug3.g11016 NA 0
LOC107443401 Ptep1.0/2.0 NW_024970267.1 208611 212150 - uncharacterized LOC107443401 aug3.g9981,aug3.g11016,aug3.g17038 LOC107443401 0
LOC122270595 Ptep1.0/2.0 NW_024970267.1 222948 230984 - uncharacterized LOC122270595 aug3.g11016 NA 0
LOC122270693 Ptep1.0/2.0 NW_024970320.1 829773 870777 + uncharacterized LOC122270693 aug3.g9818,aug3.g18193,aug3.g15566,aug3.g26714,aug3.g1097,aug3.g19330,aug3.g19261,aug3.g22403,aug3.g16329,aug3.g7403,aug3.g24358,aug3.g9152,aug3.g19188,aug3.g11063,aug3.g8790,aug3.g25600,aug3.g21923,aug3.g27165,aug3.g17253,aug3.g25298 NA 0
LOC107456085 Ptep1.0/2.0 NW_024970745.1 184298 240590 + uncharacterized LOC107456085 aug3.g8287,aug3.g9302,aug3.g17994,aug3.g26275,aug3.g18348,aug3.g24123,aug3.g8286,aug3.g11028,aug3.g25894,aug3.g10432,aug3.g27258,aug3.g15751,aug3.g2427 LOC107456085 0
LOC107438401 Ptep1.0/2.0 NW_024970928.1 205513 211411 + cuticle protein 14 aug3.g11075,aug3.g23129 LOC107438401 0
LOC122271639 Ptep1.0/2.0 NW_024971008.1 64287 92335 + uncharacterized LOC122271639 aug3.g11002 LOC107457234 2e-122
LOC107457234 Ptep1.0/2.0 NW_024971008.1 106969 152461 + pre-mRNA 3' end processing protein WDR33 aug3.g11002 LOC107457234 0
LOC107457317 Ptep1.0/2.0 NW_024971129.1 18367 41583 + uncharacterized protein DDB_G0286299 aug3.g11065 LOC107457317 0
LOC107457318 Ptep1.0/2.0 NW_024971129.1 53509 54257 - uncharacterized LOC107457318 aug3.g11066 LOC107457318 0
LOC107457314 Ptep1.0/2.0 NW_024971129.1 54470 82961 + SUMO-activating enzyme subunit 2 aug3.g11067,aug3.g11068 LOC107457314 0
LOC107457319 Ptep1.0/2.0 NW_024971129.1 88049 89451 + alpha-endosulfine aug3.g11069 LOC107457319 0
LOC107457315 Ptep1.0/2.0 NW_024971129.1 97992 120404 - dnaJ homolog subfamily C member 21 aug3.g11070 LOC107457315 0
LOC107457321 Ptep1.0/2.0 NW_024971129.1 120492 132113 + uncharacterized LOC107457321 aug3.g11071 LOC107457321 0
LOC107457322 Ptep1.0/2.0 NW_024971129.1 133116 145079 - uncharacterized LOC107457322 aug3.g11072 LOC107457322 0
LOC107457235 Ptep1.0/2.0 NW_024971397.1 16982 94037 - alkaline phosphatase aug3.g11003 LOC107457235 0
LOC107457244 Ptep1.0/2.0 NW_024971443.1 43801 66436 + ankyrin repeat domain-containing protein 13C-A aug3.g11011 LOC107457244 0
LOC107456879 Ptep1.0/2.0 NW_024971603.1 50010 76741 - ankyrin repeat and SAM domain-containing protein 1A aug3.g11026 LOC107456879 0
LOC107457245 Ptep1.0/2.0 NW_024972247.1 1997 12723 - uncharacterized LOC107457245 aug3.g11016 LOC107457245 0
LOC122268429 Ptep1.0/2.0 NW_024972467.1 21658 22867 - cuticle protein 14-like aug3.g11075 NA 0
LOC107457316 Ptep1.0/2.0 NW_024972592.1 5010 23188 + saccharopine dehydrogenase-like oxidoreductase aug3.g11074 LOC107457316 0
LOC107457325 Ptep1.0/2.0 NW_024972760.1 9509 19075 + uncharacterized LOC107457325 aug3.g11077 LOC107457325 0
LOC122272810 Ptep1.0/2.0 NW_024972894.1 3237 6555 - uncharacterized LOC122272810 aug3.g11074 NA 8e-78
LOC122273146 Ptep1.0/2.0 NW_024974375.1 4132 5866 + uncharacterized LOC122273146 aug3.g11077 NA 2e-64
LOC122273242 Ptep1.0/2.0 NW_024974908.1 3805 6392 + peroxisomal acyl-coenzyme A oxidase 3-like aug3.g1104 NA 0
LOC122273252 Ptep1.0/2.0 NW_024974952.1 411 5381 - uncharacterized LOC122273252 aug3.g11016 NA 0
LOC122273526 Ptep1.0/2.0 NW_024976970.1 173 3672 - uncharacterized LOC122273526 aug3.g11038 NA 6e-142
LOC122268544 Ptep1.0/2.0 NW_025000627.1 15 1062 + uncharacterized LOC122268544 aug3.g11039 NA 9e-53
98 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02