Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107445631 Ptep1.0/2.0 NW_024969645.1 592144 602772 - ras-related protein Rab-35 aug3.g1109 LOC107445631 0
LOC107457338 Ptep1.0/2.0 NW_024969652.1 619095 647409 - mitochondrial folate transporter/carrier aug3.g11091 LOC107457338 0
LOC107457339 Ptep1.0/2.0 NW_024969652.1 669616 715278 + putative ATP-dependent RNA helicase Pl10 aug3.g11094,aug3.g11095,aug3.g11093 LOC107457339,LOC107457340 0
LOC122272674 Ptep1.0/2.0 NW_024969652.1 716360 728570 - uncharacterized LOC122272674 aug3.g11095 NA 0
LOC107457346 Ptep1.0/2.0 NW_024969819.1 1675160 1707931 - tyrosine-protein kinase JAK2 aug3.g11099 LOC107457346 0
LOC107457343 Ptep1.0/2.0 NW_024969819.1 1713548 1714393 + uncharacterized LOC107457343 aug3.g11098 LOC107457343 0
LOC107457341 Ptep1.0/2.0 NW_024969819.1 1728542 1817400 - sodium/potassium/calcium exchanger 2-like aug3.g11097 LOC107457341 0
LOC107457345 Ptep1.0/2.0 NW_024969819.1 1940479 1950702 - uncharacterized LOC107457345 aug3.g11096 LOC107457345 0
LOC107442161 Ptep1.0/2.0 NW_024970163.1 567911 574019 - uncharacterized LOC107442161 aug3.g3470,aug3.g13707,aug3.g11098,aug3.g9883 LOC107442161 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02