Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107445686 Ptep1.0/2.0 NW_024969687.1 325047 351712 + telomere repeats-binding bouquet formation protein 1 aug3.g1117 LOC107445686 0
LOC107457438 Ptep1.0/2.0 NW_024969716.1 704855 714227 + gamma-tubulin complex component 3 homolog aug3.g11170 LOC107457438 0
LOC107457439 Ptep1.0/2.0 NW_024969716.1 719321 741457 - beta-hexosaminidase subunit alpha aug3.g11171 LOC107457439 0
LOC107457440 Ptep1.0/2.0 NW_024969716.1 741467 792751 + protein SSUH2 homolog aug3.g11174,aug3.g11173,aug3.g11172 LOC107457440 0
LOC107457435 Ptep1.0/2.0 NW_024969716.1 805230 844061 + protein SSUH2 homolog aug3.g11175 LOC107457435 0
LOC107445972 Ptep1.0/2.0 NW_024969716.1 851769 872327 + uncharacterized LOC107445972 aug3.g11176,aug3.g18850 LOC107445972 0
LOC107457444 Ptep1.0/2.0 NW_024970090.1 31224 41868 - uncharacterized LOC107457444 aug3.g11177 LOC107457444 0
LOC107457445 Ptep1.0/2.0 NW_024970090.1 43194 62353 + C-type mannose receptor 2-like aug3.g11178 LOC107457445 0
LOC107457442 Ptep1.0/2.0 NW_024970090.1 67833 90060 + C-type lection lectoxin-Enh3 aug3.g11179 LOC107457442 0
LOC122268359 Ptep1.0/2.0 NW_024970090.1 90124 92794 + uncharacterized LOC122268359 aug3.g11179 NA 0
LOC122272956 Ptep1.0/2.0 NW_024973477.1 5812 10407 + uncharacterized LOC122272956 aug3.g11178 NA 1e-76
LOC122273243 Ptep1.0/2.0 NW_024974911.1 1114 3377 - uncharacterized LOC122273243 aug3.g11172 NA 1e-66
12 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02