Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107436086 Ptep1.0/2.0 NW_024969615.1 2141198 2190802 + uncharacterized LOC107436086 aug3.g11299 LOC107436086 0
LOC107445906 Ptep1.0/2.0 NW_024969635.1 3004740 3019525 - UPF0462 protein C4orf33 homolog aug3.g112 LOC107445906 0
LOC107457539 Ptep1.0/2.0 NW_024969659.1 595765 831003 + zinc finger homeobox protein 3 aug3.g11268 LOC107457539 0
LOC107457540 Ptep1.0/2.0 NW_024969659.1 831561 880900 + uncharacterized LOC107457540 aug3.g11267 LOC107457540 0
LOC107457536 Ptep1.0/2.0 NW_024969659.1 893458 893883 - cuticle protein 10.9-like aug3.g11266 LOC107457536 0
LOC107457538 Ptep1.0/2.0 NW_024969659.1 899004 904897 - uncharacterized LOC107457538 aug3.g11264,aug3.g11265 LOC107457538 0
LOC107457534 Ptep1.0/2.0 NW_024969659.1 915954 916373 - cuticle protein 10.9-like aug3.g11263 LOC107457534 0
LOC107457533 Ptep1.0/2.0 NW_024969659.1 921311 921730 - cuticle protein 10.9-like aug3.g11262,aug3.g11263 LOC107457533 0
LOC107457532 Ptep1.0/2.0 NW_024969659.1 926363 926782 - cuticle protein 10.9-like aug3.g11261 LOC107457532 0
LOC107457581 Ptep1.0/2.0 NW_024969671.1 115369 143823 - asparagine--tRNA ligase, cytoplasmic aug3.g11286,aug3.g19159 LOC107457581 0
LOC107457578 Ptep1.0/2.0 NW_024969671.1 155372 344211 - sodium channel protein para aug3.g11284,aug3.g11285 LOC107457578 0
LOC107457579 Ptep1.0/2.0 NW_024969671.1 470324 523477 - uncharacterized LOC107457579 aug3.g11281 LOC107457579 0
LOC122268815 Ptep1.0/2.0 NW_024969682.1 1769699 1840423 - zinc finger MYM-type protein 1-like aug3.g11252 NA 0
LOC107445680 Ptep1.0/2.0 NW_024969687.1 14237 22030 - uncharacterized LOC107445680 aug3.g1127 LOC107445680 0
LOC107445677 Ptep1.0/2.0 NW_024969687.1 25559 59066 - mediator of RNA polymerase II transcription subunit 25 aug3.g1126 LOC107445677 0
LOC107445669 Ptep1.0/2.0 NW_024969687.1 63903 70447 + uncharacterized LOC107445669 aug3.g1125 LOC107445669 0
LOC107445670 Ptep1.0/2.0 NW_024969687.1 71504 113213 + transcription factor COE1 aug3.g1124 LOC107445670 0
LOC107445674 Ptep1.0/2.0 NW_024969687.1 120245 136082 + uncharacterized LOC107445674 aug3.g1123 LOC107445674 0
LOC107445281 Ptep1.0/2.0 NW_024969687.1 196765 210813 + autophagy-related protein 8f aug3.g1120,aug3.g18439 LOC107445281 0
LOC107442127 Ptep1.0/2.0 NW_024969699.1 605996 1129701 - neuron navigator 2 aug3.g16374,aug3.g11225 LOC107442127 0
LOC107436079 Ptep1.0/2.0 NW_024969701.1 15109 34629 + cell adhesion molecule 2-like aug3.g11288 LOC107436079 0
LOC107436080 Ptep1.0/2.0 NW_024969701.1 47399 63926 - ubiquitin-conjugating enzyme E2 T aug3.g11289 LOC107436080 0
LOC107436081 Ptep1.0/2.0 NW_024969701.1 64123 73094 + PAT complex subunit Asterix aug3.g11290 LOC107436081 0
LOC107436082 Ptep1.0/2.0 NW_024969701.1 86723 114519 + protein bicaudal C homolog 1 aug3.g11292 LOC107436082 0
LOC107457551 Ptep1.0/2.0 NW_024969726.1 810278 842713 + E3 ubiquitin-protein ligase LRSAM1 aug3.g11280 LOC107457551 0
LOC107457549 Ptep1.0/2.0 NW_024969726.1 851845 885468 + cytosolic phospholipase A2 aug3.g11278,aug3.g11279 LOC107457549 0
LOC122269063 Ptep1.0/2.0 NW_024969726.1 885967 890965 - uncharacterized LOC122269063 aug3.g11277 NA 0
LOC107457548 Ptep1.0/2.0 NW_024969726.1 891147 973389 + nuclear hormone receptor FTZ-F1 beta aug3.g11276 LOC107457548 0
LOC107457547 Ptep1.0/2.0 NW_024969726.1 980251 1015232 + protein PFC0760c aug3.g11275 LOC107457547 0
LOC107457546 Ptep1.0/2.0 NW_024969726.1 1049835 1051046 - glutamate receptor ionotropic, delta-2-like aug3.g11274 LOC107457546 0
LOC107442376 Ptep1.0/2.0 NW_024969741.1 889883 934119 + beta,beta-carotene 15,15'-dioxygenase aug3.g16558,aug3.g11224,aug3.g24409 LOC107442376 0
LOC107457501 Ptep1.0/2.0 NW_024969741.1 960717 1014432 - general transcriptional corepressor trfA aug3.g11222 LOC107457501 0
LOC107457499 Ptep1.0/2.0 NW_024969741.1 1031396 1042457 - neprilysin-1-like aug3.g11221 LOC107457499 0
LOC107457497 Ptep1.0/2.0 NW_024969741.1 1042600 1071693 - neprilysin-1-like aug3.g11221 LOC107457497 0
LOC122269116 Ptep1.0/2.0 NW_024969741.1 1110182 1113401 - uncharacterized LOC122269116 aug3.g50,aug3.g11218 NA 0
LOC107457500 Ptep1.0/2.0 NW_024969741.1 1118269 1134864 - mucin-13 aug3.g11217 LOC107457500 2e-154
LOC122269263 Ptep1.0/2.0 NW_024969778.1 115940 117343 + uncharacterized LOC122269263 aug3.g26848,aug3.g11251 NA 0
LOC107436355 Ptep1.0/2.0 NW_024969815.1 763066 807749 - oocyte zinc finger protein XlCOF6.1 aug3.g18966,aug3.g16370,aug3.g11139,aug3.g23931,aug3.g10099,aug3.g19028,aug3.g26680,aug3.g658,aug3.g6866,aug3.g3777,aug3.g13767,aug3.g1246,aug3.g20365,aug3.g12813,aug3.g18681,aug3.g5858,aug3.g20791,aug3.g17997,aug3.g11223,aug3.g15649,aug3.g3781,aug3.g2204 LOC107454207,LOC107436355 0
LOC110282030 Ptep1.0/2.0 NW_024969821.1 671028 678079 - zinc finger MYM-type protein 1-like aug3.g11252 LOC110282030 0
LOC107446512 Ptep1.0/2.0 NW_024969827.1 325651 346282 - methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial aug3.g11200,aug3.g19234 LOC107446512,LOC107457463 0
LOC107457543 Ptep1.0/2.0 NW_024969872.1 732656 826869 - nuclear receptor subfamily 2 group F member 1-A aug3.g11272 LOC107457543,LOC107457545 0
LOC107457468 Ptep1.0/2.0 NW_024969975.1 108574 181666 - buccalin aug3.g11206 LOC107457468 0
LOC107457469 Ptep1.0/2.0 NW_024969975.1 346409 393523 - sorting nexin-13 aug3.g11208,aug3.g11209,aug3.g24238 LOC107457469,LOC107442248 0
LOC107457519 Ptep1.0/2.0 NW_024970002.1 664378 668402 + dual specificity tyrosine-phosphorylation-regulated kinase 2-like aug3.g11248 LOC107457519 0
LOC107439188 Ptep1.0/2.0 NW_024970012.1 684254 746383 + pseudogene aug3.g26718,aug3.g18189,aug3.g11205,aug3.g19 LOC107439188 0
LOC122270181 Ptep1.0/2.0 NW_024970083.1 188283 189578 - general transcription factor II-I repeat domain-containing protein 2-like aug3.g11251 NA 3e-21
LOC107439174 Ptep1.0/2.0 NW_024970106.1 1480198 1507433 - S-adenosylmethionine sensor upstream of mTORC1 aug3.g26701,aug3.g19126,aug3.g2982,aug3.g27260,aug3.g11936,aug3.g23713,aug3.g2296,aug3.g22406,aug3.g8408,aug3.g22914,aug3.g21080,aug3.g20545,aug3.g3761,aug3.g4881,aug3.g19704,aug3.g16522,aug3.g5565,aug3.g11212,aug3.g25515,aug3.g3769,aug3.g3195,aug3.g26523 LOC107439174 0
LOC107457472 Ptep1.0/2.0 NW_024970204.1 794302 810018 - acidic repeat-containing protein aug3.g11214 LOC107457472 0
LOC107457467 Ptep1.0/2.0 NW_024970223.1 477714 614149 + prothoracicostatic peptides aug3.g11204 LOC107457467 0
LOC107436085 Ptep1.0/2.0 NW_024970315.1 1076 44197 + RNA cytidine acetyltransferase aug3.g11298 LOC107436085 0
LOC107436084 Ptep1.0/2.0 NW_024970315.1 48729 71870 - uncharacterized LOC107436084 aug3.g11297 LOC107436084 0
LOC107436083 Ptep1.0/2.0 NW_024970315.1 107357 130318 + glycoprotein 3-alpha-L-fucosyltransferase A aug3.g11296 LOC107436083 0
LOC107457525 Ptep1.0/2.0 NW_024970358.1 61402 77615 - rho-related GTP-binding protein RhoE-like aug3.g11259,aug3.g10986,aug3.g6798,aug3.g12449,aug3.g6435,aug3.g18641,aug3.g27190,aug3.g23455,aug3.g14611,aug3.g11493 LOC107457525 0
LOC107457530 Ptep1.0/2.0 NW_024970358.1 132833 141272 + proline-rich protein 4 aug3.g11258 LOC107457530 0
LOC107457524 Ptep1.0/2.0 NW_024970358.1 330274 339717 + mitochondrial translation release factor in rescue-like aug3.g11255 LOC107457524 0
LOC107457529 Ptep1.0/2.0 NW_024970358.1 330441 332641 + uncharacterized LOC107457529 aug3.g11256 LOC107457529 0
LOC107457528 Ptep1.0/2.0 NW_024970358.1 341945 355741 - synaptic vesicle membrane protein VAT-1 homolog aug3.g11254 LOC107457528 0
LOC107457526 Ptep1.0/2.0 NW_024970358.1 355898 379892 + coiled-coil domain-containing protein 177 aug3.g11253 LOC107457526 0
LOC122270866 Ptep1.0/2.0 NW_024970416.1 206387 207679 - general transcription factor II-I repeat domain-containing protein 2-like aug3.g11251 NA 3e-21
LOC107445676 Ptep1.0/2.0 NW_024970637.1 205919 233525 + late secretory pathway protein AVL9 homolog aug3.g1130,aug3.g1129 LOC107445676 0
LOC107445679 Ptep1.0/2.0 NW_024970637.1 240088 252114 - post-GPI attachment to proteins factor 3 aug3.g1129 LOC107445679 0
LOC107445681 Ptep1.0/2.0 NW_024970637.1 253228 276487 + lipase maturation factor 2 aug3.g1128 LOC107445681 0
LOC107439193 Ptep1.0/2.0 NW_024970656.1 11008 11731 - zinc finger MYM-type protein 1-like aug3.g11252,aug3.g17758,aug3.g9201,aug3.g2277 LOC107439193 0
LOC122271237 Ptep1.0/2.0 NW_024970656.1 276312 277061 - uncharacterized LOC122271237 aug3.g11252 NA 0
LOC122271400 Ptep1.0/2.0 NW_024970775.1 215752 219960 + uncharacterized LOC122271400 aug3.g11252 NA 0
LOC107436443 Ptep1.0/2.0 NW_024970916.1 60984 86261 - pollen-specific leucine-rich repeat extensin-like protein 1 aug3.g11571,aug3.g11210,aug3.g26088,aug3.g16761,aug3.g25216,aug3.g18234 LOC107436443 0
LOC122271620 Ptep1.0/2.0 NW_024970991.1 36993 65347 + uncharacterized LOC122271620 aug3.g11203 NA 0
LOC107457465 Ptep1.0/2.0 NW_024970991.1 70438 104254 + uncharacterized LOC107457465 aug3.g11203 LOC107457465 0
LOC122271619 Ptep1.0/2.0 NW_024970991.1 105886 115207 + uncharacterized LOC122271619 aug3.g11203 LOC110282876 0
LOC107457466 Ptep1.0/2.0 NW_024970991.1 123959 149673 - catalase aug3.g11202 LOC107457466 0
LOC122271800 Ptep1.0/2.0 NW_024971157.1 14001 17342 + zinc finger MYM-type protein 1-like aug3.g11252 NA 0
LOC107457517 Ptep1.0/2.0 NW_024971257.1 13855 51591 + G1/S-specific cyclin-D2 aug3.g11246,aug3.g11247 LOC107457517 0
LOC107457518 Ptep1.0/2.0 NW_024971257.1 66102 77201 + major facilitator superfamily domain-containing protein 3 aug3.g11247 LOC107457518 0
LOC107451084 Ptep1.0/2.0 NW_024971398.1 79561 80124 + uncharacterized LOC107451084 aug3.g3784,aug3.g3786,aug3.g11230 LOC107451084 0
LOC107448933 Ptep1.0/2.0 NW_024971691.1 6476 14171 + uncharacterized LOC107448933 aug3.g10404,aug3.g11249 LOC107448933 0
LOC107457509 Ptep1.0/2.0 NW_024972195.1 21533 22828 - ATP-dependent DNA helicase pif1-like aug3.g11238 LOC107457509 0
LOC107445675 Ptep1.0/2.0 NW_024972278.1 3938 14942 - autophagy-related protein 8f aug3.g1120 LOC107445675 0
LOC107445279 Ptep1.0/2.0 NW_024972278.1 19660 30413 - uncharacterized LOC107445279 aug3.g18441,aug3.g1120 LOC107445279 0
LOC107457515 Ptep1.0/2.0 NW_024972429.1 3350 12423 + uncharacterized LOC107457515 aug3.g11232 LOC107457515 0
LOC107457510 Ptep1.0/2.0 NW_024972524.1 7410 8396 + uncharacterized LOC107457510 aug3.g11244 LOC107457510 0
LOC122272833 Ptep1.0/2.0 NW_024972988.1 4590 5087 + uncharacterized LOC122272833 aug3.g21195,aug3.g18030,aug3.g1775,aug3.g3151,aug3.g18048,aug3.g11229,aug3.g13917,aug3.g23670,aug3.g101,aug3.g5304,aug3.g2007,aug3.g4720,aug3.g1160,aug3.g18760,aug3.g4669 NA 0
LOC122273043 Ptep1.0/2.0 NW_024973830.1 9592 10767 - SCAN domain-containing protein 3-like aug3.g11215 NA 0
LOC107457511 Ptep1.0/2.0 NW_024973937.1 5773 8387 + DNA polymerase delta catalytic subunit-like aug3.g11245 LOC107457511 0
LOC122273207 Ptep1.0/2.0 NW_024974684.1 4140 6808 - uncharacterized LOC122273207 aug3.g11242 NA 0
LOC122273484 Ptep1.0/2.0 NW_024976505.1 4274 4763 - cuticle protein 10.9-like aug3.g11262 NA 0
LOC122273589 Ptep1.0/2.0 NW_024977523.1 2085 2631 + cuticle protein 10.9-like aug3.g11264 NA 0
LOC107445903 Ptep1.0/2.0 NW_024977754.1 2840 3274 + protein ZBED8-like aug3.g21001,aug3.g11215 LOC107445903 0
LOC122273624 Ptep1.0/2.0 NW_024977849.1 217 2123 - uncharacterized LOC122273624 aug3.g11252 NA 0
LOC122273635 Ptep1.0/2.0 NW_024977976.1 809 2850 + sorting nexin-13-like aug3.g11208 LOC107457469 0
LOC107457496 Ptep1.0/2.0 NW_024980143.1 2100 3850 - uncharacterized LOC107457496 aug3.g11220 LOC107457496 0
LOC122273905 Ptep1.0/2.0 NW_024983054.1 118739 120034 + general transcription factor II-I repeat domain-containing protein 2-like aug3.g11251 NA 3e-21
LOC122273967 Ptep1.0/2.0 NW_024985135.1 562 1044 + uncharacterized LOC122273967 aug3.g11252 NA 0
LOC122268472 Ptep1.0/2.0 NW_024993830.1 187 1005 - zinc finger MYM-type protein 1-like aug3.g11252 NA 0
93 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02