Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107457539 Ptep1.0/2.0 NW_024969659.1 595765 831003 + zinc finger homeobox protein 3 aug3.g11268 LOC107457539 0
LOC107457540 Ptep1.0/2.0 NW_024969659.1 831561 880900 + uncharacterized LOC107457540 aug3.g11267 LOC107457540 0
LOC107457536 Ptep1.0/2.0 NW_024969659.1 893458 893883 - cuticle protein 10.9-like aug3.g11266 LOC107457536 0
LOC107457538 Ptep1.0/2.0 NW_024969659.1 899004 904897 - uncharacterized LOC107457538 aug3.g11264,aug3.g11265 LOC107457538 0
LOC107457534 Ptep1.0/2.0 NW_024969659.1 915954 916373 - cuticle protein 10.9-like aug3.g11263 LOC107457534 0
LOC107457533 Ptep1.0/2.0 NW_024969659.1 921311 921730 - cuticle protein 10.9-like aug3.g11262,aug3.g11263 LOC107457533 0
LOC107457532 Ptep1.0/2.0 NW_024969659.1 926363 926782 - cuticle protein 10.9-like aug3.g11261 LOC107457532 0
LOC107445677 Ptep1.0/2.0 NW_024969687.1 25559 59066 - mediator of RNA polymerase II transcription subunit 25 aug3.g1126 LOC107445677 0
LOC122273484 Ptep1.0/2.0 NW_024976505.1 4274 4763 - cuticle protein 10.9-like aug3.g11262 NA 0
LOC122273589 Ptep1.0/2.0 NW_024977523.1 2085 2631 + cuticle protein 10.9-like aug3.g11264 NA 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02