Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107445680 Ptep1.0/2.0 NW_024969687.1 14237 22030 - uncharacterized LOC107445680 aug3.g1127 LOC107445680 0
LOC107457549 Ptep1.0/2.0 NW_024969726.1 851845 885468 + cytosolic phospholipase A2 aug3.g11278,aug3.g11279 LOC107457549 0
LOC122269063 Ptep1.0/2.0 NW_024969726.1 885967 890965 - uncharacterized LOC122269063 aug3.g11277 NA 0
LOC107457548 Ptep1.0/2.0 NW_024969726.1 891147 973389 + nuclear hormone receptor FTZ-F1 beta aug3.g11276 LOC107457548 0
LOC107457547 Ptep1.0/2.0 NW_024969726.1 980251 1015232 + protein PFC0760c aug3.g11275 LOC107457547 0
LOC107457546 Ptep1.0/2.0 NW_024969726.1 1049835 1051046 - glutamate receptor ionotropic, delta-2-like aug3.g11274 LOC107457546 0
LOC107457543 Ptep1.0/2.0 NW_024969872.1 732656 826869 - nuclear receptor subfamily 2 group F member 1-A aug3.g11272 LOC107457543,LOC107457545 0
7 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02