Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107445809 Ptep1.0/2.0 NW_024969680.1 1935921 1948616 + RNA-binding protein 41 aug3.g1178,aug3.g22685 LOC107445698,LOC107445809 0
LOC107447687 Ptep1.0/2.0 NW_024969709.1 571893 961241 + teneurin-m aug3.g1857,aug3.g11785 LOC107447687 0
LOC107436716 Ptep1.0/2.0 NW_024969709.1 1127547 1499267 + uncharacterized LOC107436716 aug3.g11782 LOC107436716,LOC107436713 0.00000000002
LOC107436712 Ptep1.0/2.0 NW_024969709.1 1198490 1211853 + nucleoside diphosphate kinase homolog 5-like aug3.g11783 LOC107436712 0
LOC107436714 Ptep1.0/2.0 NW_024969709.1 1479203 1553645 - uncharacterized LOC107436714 aug3.g11782 LOC107436714 8e-106
LOC107436707 Ptep1.0/2.0 NW_024970033.1 409717 454849 - DNA-directed RNA polymerase III subunit RPC1 aug3.g11780 LOC107436707 0
LOC107436710 Ptep1.0/2.0 NW_024970033.1 461503 476356 - leucine-rich repeat-containing protein 20-like aug3.g11781 LOC107436710 0
LOC107445871 Ptep1.0/2.0 NW_024970153.1 57552 61499 - alpha-latrocrustotoxin-Lt1a-like aug3.g1193,aug3.g5236,aug3.g16830,aug3.g11789,aug3.g20112,aug3.g20110 LOC107445871 0
LOC107453209 Ptep1.0/2.0 NW_024970183.1 529921 530361 + uncharacterized LOC107453209 aug3.g3476,aug3.g23861,aug3.g11787 LOC107453209 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02