Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107436847 Ptep1.0/2.0 NW_024969813.1 635864 695250 + T-box transcription factor TBX20-like aug3.g11865 LOC107436847 0
LOC107445873 Ptep1.0/2.0 NW_024970153.1 524012 533816 - uncharacterized LOC107445873 aug3.g1186 LOC107445873 0
LOC107436829 Ptep1.0/2.0 NW_024970222.1 396250 424933 + AP-4 complex subunit epsilon-1 aug3.g11861 LOC107436829 0
LOC107436831 Ptep1.0/2.0 NW_024970222.1 425609 435085 - nose resistant to fluoxetine protein 6 aug3.g11862 LOC107436831 0
LOC122270517 Ptep1.0/2.0 NW_024970222.1 437627 439987 - uncharacterized LOC122270517 aug3.g11862 LOC107436831 1e-167
LOC107438388 Ptep1.0/2.0 NW_024970222.1 443426 455659 - uncharacterized LOC107438388 aug3.g11862,aug3.g23127 LOC107438388 0
LOC107436832 Ptep1.0/2.0 NW_024970222.1 468443 529159 - nose resistant to fluoxetine protein 6-like aug3.g11862,aug3.g11863,aug3.g24399,aug3.g21164 LOC107436832,LOC107456990 0
LOC107436850 Ptep1.0/2.0 NW_024970457.1 11346 15743 - retinaldehyde-binding protein 1-like aug3.g11866 LOC107436850 0
LOC107436851 Ptep1.0/2.0 NW_024970457.1 21077 133280 - alpha-tocopherol transfer protein-like aug3.g11867 LOC107436851 0
LOC122272405 Ptep1.0/2.0 NW_024971959.1 27405 32999 + uncharacterized LOC122272405 aug3.g11863 NA 0
LOC107436828 Ptep1.0/2.0 NW_024972021.1 25777 39534 - lipase member H-like aug3.g11864,aug3.g6184,aug3.g16543 LOC107436828 0
LOC107436833 Ptep1.0/2.0 NW_024974027.1 410 5390 - nose resistant to fluoxetine protein 6-like aug3.g11862 LOC107436833 0
LOC122273734 Ptep1.0/2.0 NW_024979255.1 125 1775 + uncharacterized LOC122273734 aug3.g11864 NA 4e-113
13 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02