Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107439618 Ptep1.0/2.0 NW_024970068.1 134988 326627 + uncharacterized LOC107439618 aug3.g13925,aug3.g11879 LOC107439618 0
LOC107445872 Ptep1.0/2.0 NW_024970153.1 390232 520719 + uncharacterized LOC107445872 aug3.g1187 LOC107445872,LOC107445876 0
LOC110282230 Ptep1.0/2.0 NW_024970670.1 51732 53838 - uncharacterized LOC110282230 aug3.g11871 LOC110282230 0
LOC107436855 Ptep1.0/2.0 NW_024970670.1 79926 88008 - degenerin deg-1-like aug3.g11871 LOC107436855 0
LOC107436856 Ptep1.0/2.0 NW_024970670.1 103299 122725 - pseudogene aug3.g11872 LOC107436856 1e-125
LOC107439056 Ptep1.0/2.0 NW_024970820.1 187404 217329 - uncharacterized LOC107439056 aug3.g26674,aug3.g11873,aug3.g14157 LOC107439056 0
LOC110282968 Ptep1.0/2.0 NW_024972069.1 29430 31975 + uncharacterized LOC110282968 aug3.g3958,aug3.g11877 LOC110282968 0
LOC122273874 Ptep1.0/2.0 NW_024982163.1 292 1846 + uncharacterized LOC122273874 aug3.g11876 NA 0
8 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02