Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107445875 Ptep1.0/2.0 NW_024970153.1 248297 264047 + sodium/potassium-transporting ATPase subunit beta-1-interacting protein 1-like aug3.g1189 LOC107445875 0
LOC107436881 Ptep1.0/2.0 NW_024970684.1 29791 81803 - sodium-dependent phosphate transport protein 1 aug3.g11899 LOC107436881 0
LOC107436880 Ptep1.0/2.0 NW_024970684.1 110805 131439 + uncharacterized LOC107436880 aug3.g11898 LOC107436880 0
LOC107436869 Ptep1.0/2.0 NW_024970684.1 133882 146979 - kelch-like protein 10 aug3.g11897,aug3.g23411 LOC107436869 0
LOC107436879 Ptep1.0/2.0 NW_024970684.1 153649 160560 + uncharacterized LOC107436879 aug3.g11896 LOC107436879 0
LOC107436878 Ptep1.0/2.0 NW_024970684.1 164248 165351 - succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial aug3.g11895 LOC107436878 0
LOC107436877 Ptep1.0/2.0 NW_024970684.1 166269 176403 + uncharacterized LOC107436877 aug3.g11894 LOC107436877 0
LOC107436873 Ptep1.0/2.0 NW_024970684.1 183515 210021 + DDB1- and CUL4-associated factor 8 aug3.g11893 LOC107436873 0
LOC107436874 Ptep1.0/2.0 NW_024970684.1 210794 228814 - ankyrin repeat and SAM domain-containing protein 3 aug3.g11892 LOC107436874 0
LOC107436876 Ptep1.0/2.0 NW_024970684.1 228921 230303 + ADP-ribosylation factor-like protein 8B-A aug3.g11891 LOC107436876 0
LOC107436871 Ptep1.0/2.0 NW_024970684.1 240199 241015 - craniofacial development protein 1-like aug3.g11890 LOC107436871 0
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02