Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107446023 Ptep1.0/2.0 NW_024970146.1 698322 736884 + uncharacterized LOC107446023 aug3.g1206 LOC107446023 0
LOC107437140 Ptep1.0/2.0 NW_024970615.1 28509 42770 + hydroxyacid oxidase 1-like aug3.g12063,aug3.g17840 LOC107437140 0
LOC107437141 Ptep1.0/2.0 NW_024970615.1 47554 53685 + small proline-rich protein 2B-like aug3.g12064 LOC107437141 0
LOC107437144 Ptep1.0/2.0 NW_024970615.1 80138 119579 + DNA damage-binding protein 1 aug3.g12065 LOC107437144 0
LOC107437145 Ptep1.0/2.0 NW_024970615.1 121525 134557 - uncharacterized LOC107437145 aug3.g12066 LOC107437145 0
LOC107437146 Ptep1.0/2.0 NW_024970615.1 141677 210063 + uncharacterized LOC107437146 aug3.g12067 LOC107437146 0
LOC107437142 Ptep1.0/2.0 NW_024970615.1 275324 278132 + cyclase-like protein 4 aug3.g12068 LOC107437142 0
LOC107441462 Ptep1.0/2.0 NW_024971108.1 90961 92049 - uncharacterized LOC107441462 aug3.g12062,aug3.g15933 LOC107441462 0
LOC107437132 Ptep1.0/2.0 NW_024971108.1 101115 147848 - uncharacterized LOC107437132 aug3.g12061 LOC107437132 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02