Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107446095 Ptep1.0/2.0 NW_024969638.1 434746 478809 + ER degradation-enhancing alpha-mannosidase-like protein 3 aug3.g1221 LOC107446095 0
LOC122269546 Ptep1.0/2.0 NW_024969856.1 467156 482257 + uncharacterized LOC122269546 aug3.g12213 NA 2e-42
LOC107437317 Ptep1.0/2.0 NW_024969939.1 1031761 1044261 + extracellular serine/threonine protein CG31145-like aug3.g12213 LOC107437317 0
LOC107437337 Ptep1.0/2.0 NW_024969996.1 183565 222413 + retinal-binding protein aug3.g12219,aug3.g12218 LOC107437337 0
LOC107437338 Ptep1.0/2.0 NW_024969996.1 217197 265448 - SEC14-like protein 2 aug3.g12218 LOC107437338 0
LOC107437336 Ptep1.0/2.0 NW_024969996.1 280042 300550 - uncharacterized LOC107437336 aug3.g12216 LOC107437336 0
LOC107437335 Ptep1.0/2.0 NW_024969996.1 302270 308577 + zinc finger protein 26 aug3.g12215 LOC107437335 0
LOC107445181 Ptep1.0/2.0 NW_024969996.1 316461 490480 - uncharacterized LOC107445181 aug3.g18369,aug3.g12214 LOC107445181 0
LOC107437321 Ptep1.0/2.0 NW_024970793.1 30859 125076 - clavesin-2 aug3.g12210 LOC107437321 0
LOC107437319 Ptep1.0/2.0 NW_024970793.1 142052 148910 + uncharacterized LOC107437319 aug3.g12211 LOC107437319 0
LOC122271424 Ptep1.0/2.0 NW_024970793.1 157653 165363 + uncharacterized LOC122271424 aug3.g12212 LOC107437322 0
LOC107437322 Ptep1.0/2.0 NW_024970793.1 168970 185903 + extracellular serine/threonine protein CG31145-like aug3.g12212 LOC107437322 0
LOC107446380 Ptep1.0/2.0 NW_024970793.1 193981 215109 - extracellular serine/threonine protein kinase FAM20C-like aug3.g12213 LOC107446380 4e-155
LOC122273959 Ptep1.0/2.0 NW_024984889.1 207 1267 - uncharacterized LOC122273959 aug3.g12212 LOC107437322 1e-107
14 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02