Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107446078 Ptep1.0/2.0 NW_024969638.1 776378 795041 - seipin aug3.g1229 LOC107446078 0
LOC107437430 Ptep1.0/2.0 NW_024970106.1 74506 87442 - putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase aug3.g12290 LOC107437430 0
LOC107437432 Ptep1.0/2.0 NW_024970106.1 94959 124863 + tRNA pseudouridine(38/39) synthase aug3.g12292 LOC107437432 0
LOC107437431 Ptep1.0/2.0 NW_024970106.1 122088 533648 - uncharacterized LOC107437431 aug3.g12293 LOC107437431 0
LOC107437434 Ptep1.0/2.0 NW_024970106.1 189949 199527 + apolipoprotein D aug3.g12295 LOC107437434 0
LOC107437433 Ptep1.0/2.0 NW_024970106.1 212221 220748 + apolipoprotein D-like aug3.g12296 LOC107437433 0
LOC107437436 Ptep1.0/2.0 NW_024970106.1 237673 242975 + uncharacterized LOC107437436 aug3.g4137,aug3.g12297 LOC107437436 0
LOC107437435 Ptep1.0/2.0 NW_024970106.1 257336 281125 + uncharacterized LOC107437435 aug3.g12298,aug3.g4137 LOC107437435 0
8 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02