Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107437471 Ptep1.0/2.0 NW_024969819.1 4212 34534 + uncharacterized LOC107437471 aug3.g12332,aug3.g20218 LOC107437471 0
LOC122271326 Ptep1.0/2.0 NW_024970729.1 42733 45934 + uncharacterized LOC122271326 aug3.g25391,aug3.g12331 NA 0
LOC122271790 Ptep1.0/2.0 NW_024971144.1 2789 5364 - uncharacterized LOC122271790 aug3.g12330 LOC107437467 2e-179
LOC107437467 Ptep1.0/2.0 NW_024971144.1 9325 16519 - elongation of very long chain fatty acids protein 7 aug3.g12330 LOC107437467 0
LOC107446071 Ptep1.0/2.0 NW_024971845.1 3052 11689 - V-type proton ATPase subunit D aug3.g1233 LOC107446071 0
LOC107437465 Ptep1.0/2.0 NW_024972101.1 14006 14662 + histone-lysine N-methyltransferase SETMAR aug3.g12333,aug3.g2791,aug3.g27917 LOC107437465 0
LOC122272563 Ptep1.0/2.0 NW_024972256.1 1273 8208 - uncharacterized LOC122272563 aug3.g12339 NA 0
LOC107437472 Ptep1.0/2.0 NW_024972256.1 8854 18254 - plasma kallikrein-like aug3.g12339 LOC107437472 0
LOC107437466 Ptep1.0/2.0 NW_024972511.1 1068 1526 - uncharacterized LOC107437466 aug3.g12334,aug3.g4874,aug3.g16916 LOC107437466 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02