Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107437479 Ptep1.0/2.0 NW_024969968.1 716679 739026 - early endosome antigen 1 aug3.g12350 LOC107437479 0
LOC107451665 Ptep1.0/2.0 NW_024969974.1 543662 554022 - putative serine/threonine-protein kinase PRKY aug3.g695,aug3.g12358,aug3.g4204 LOC107451665 0
LOC107437488 Ptep1.0/2.0 NW_024970109.1 34178 52683 + uncharacterized LOC107437488 aug3.g12356 LOC107437488 0
LOC107437484 Ptep1.0/2.0 NW_024970109.1 52468 150824 - uncharacterized LOC107437484 aug3.g12355 LOC107437484,LOC107437487 0
LOC107437485 Ptep1.0/2.0 NW_024970109.1 115945 160291 + major facilitator superfamily domain-containing protein 6 aug3.g12354 LOC107437485 0
LOC107437486 Ptep1.0/2.0 NW_024970109.1 167757 178276 - mesencephalic astrocyte-derived neurotrophic factor homolog aug3.g12353 LOC107437486 0
LOC107437483 Ptep1.0/2.0 NW_024970618.1 245006 258020 + uncharacterized LOC107437483 aug3.g12352 LOC107437483 0
LOC107437480 Ptep1.0/2.0 NW_024970618.1 260875 270577 - solute carrier family 35 member E3 aug3.g12351 LOC107437480 0
LOC122271173 Ptep1.0/2.0 NW_024970618.1 270682 281716 + early endosome antigen 1-like aug3.g12350 LOC107437479 0
LOC122271172 Ptep1.0/2.0 NW_024970618.1 282578 284905 + uncharacterized LOC122271172 aug3.g12350 LOC107437479 0
LOC107446087 Ptep1.0/2.0 NW_024971845.1 21876 36427 - ero1-like protein aug3.g1235 LOC107446087 0
LOC122273101 Ptep1.0/2.0 NW_024974133.1 2765 6715 + uncharacterized LOC122273101 aug3.g12358 NA 1e-121
LOC122273936 Ptep1.0/2.0 NW_024983924.1 463 2181 + uncharacterized LOC122273936 aug3.g12350 LOC107437479 6e-120
13 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02