Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107446079 Ptep1.0/2.0 NW_024969727.1 127828 187473 + putative sodium-dependent multivitamin transporter aug3.g1239 LOC107446079 0
LOC107441274 Ptep1.0/2.0 NW_024970016.1 214038 221072 - uncharacterized LOC107441274 aug3.g12396,aug3.g20231 LOC107441274 0
LOC107437544 Ptep1.0/2.0 NW_024970016.1 628345 632463 - NPC intracellular cholesterol transporter 2-like aug3.g12399 LOC107437544 0
LOC107437549 Ptep1.0/2.0 NW_024970016.1 645391 653731 + uncharacterized LOC107437549 aug3.g12398 LOC107437549 0
LOC107437541 Ptep1.0/2.0 NW_024970063.1 303879 328499 + uncharacterized LOC107437541 aug3.g12393 LOC107437541 0
LOC107437539 Ptep1.0/2.0 NW_024970063.1 335189 343576 + uncharacterized LOC107437539 aug3.g12392 LOC107437539 0
LOC107437538 Ptep1.0/2.0 NW_024970063.1 356360 378338 + uncharacterized LOC107437538 aug3.g12391 LOC107437538 0
LOC107437540 Ptep1.0/2.0 NW_024970063.1 383757 400409 + uncharacterized LOC107437540 aug3.g12390 LOC107437540 0
LOC122272312 Ptep1.0/2.0 NW_024971766.1 35661 45842 + uncharacterized LOC122272312 aug3.g12396 NA 0
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02