Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107437583 Ptep1.0/2.0 NW_024970026.1 444001 455377 + uncharacterized LOC107437583 aug3.g12440 LOC107437583 0
LOC107437584 Ptep1.0/2.0 NW_024970026.1 458419 469254 + uncharacterized LOC107437584 aug3.g12441 LOC107437584 0
LOC107437585 Ptep1.0/2.0 NW_024970026.1 470643 477152 - uncharacterized LOC107437585 aug3.g12442 LOC107437585 0
LOC107437586 Ptep1.0/2.0 NW_024970026.1 485754 494227 - uncharacterized LOC107437586 aug3.g12443 LOC107437586 0
LOC107437588 Ptep1.0/2.0 NW_024970026.1 503831 505090 - 5'-AMP-activated protein kinase subunit beta-1-like aug3.g12444 LOC107437588 0
LOC107437590 Ptep1.0/2.0 NW_024970026.1 505268 538438 + metalloendopeptidase OMA1, mitochondrial aug3.g12445 LOC107437590 0
LOC107437589 Ptep1.0/2.0 NW_024970026.1 530465 646701 - disabled homolog 2 aug3.g12446 LOC107437589 0
LOC107446121 Ptep1.0/2.0 NW_024970058.1 295036 338384 + nuclear receptor coactivator 2 aug3.g1244,aug3.g1243 LOC107446121 0
LOC107457525 Ptep1.0/2.0 NW_024970358.1 61402 77615 - rho-related GTP-binding protein RhoE-like aug3.g11259,aug3.g10986,aug3.g6798,aug3.g12449,aug3.g6435,aug3.g18641,aug3.g27190,aug3.g23455,aug3.g14611,aug3.g11493 LOC107457525 0
LOC122273334 Ptep1.0/2.0 NW_024975539.1 882 5687 + disabled homolog 1-like aug3.g12446 LOC107437589 0
10 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02