Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107437598 Ptep1.0/2.0 NW_024969600.1 83580 116959 - acyl-protein thioesterase 2 aug3.g12460 LOC107437598 0
LOC107437600 Ptep1.0/2.0 NW_024969600.1 138809 160617 - myb-like protein X aug3.g12461 LOC107437600 0
LOC107437628 Ptep1.0/2.0 NW_024969663.1 1172344 1248434 + leucine-rich repeat-containing protein let-4 aug3.g12465 LOC107437628 0
LOC107436428 Ptep1.0/2.0 NW_024969716.1 1157388 1210293 - uncharacterized LOC107436428 aug3.g11558,aug3.g12468 LOC107436428 0
LOC107437636 Ptep1.0/2.0 NW_024969716.1 1185720 1187482 + ubiquinone biosynthesis protein COQ4 homolog, mitochondrial-like aug3.g12467 LOC107437636 0
LOC122269006 Ptep1.0/2.0 NW_024969716.1 1223210 1235499 - uncharacterized LOC122269006 aug3.g12469 NA 0
LOC107437637 Ptep1.0/2.0 NW_024969716.1 1236014 1266546 - uncharacterized LOC107437637 aug3.g12469 LOC107437637 0
LOC107436355 Ptep1.0/2.0 NW_024969815.1 763066 807749 - oocyte zinc finger protein XlCOF6.1 aug3.g18966,aug3.g16370,aug3.g11139,aug3.g23931,aug3.g10099,aug3.g19028,aug3.g26680,aug3.g658,aug3.g6866,aug3.g3777,aug3.g13767,aug3.g1246,aug3.g20365,aug3.g12813,aug3.g18681,aug3.g5858,aug3.g20791,aug3.g17997,aug3.g11223,aug3.g15649,aug3.g3781,aug3.g2204 LOC107454207,LOC107436355 0
LOC107437602 Ptep1.0/2.0 NW_024970747.1 85277 124784 + G protein-activated inward rectifier potassium channel 3 aug3.g12464 LOC107437602 0
LOC107446125 Ptep1.0/2.0 NW_024971153.1 92521 107467 + uncharacterized LOC107446125 aug3.g1246 LOC107446125 0
LOC107437629 Ptep1.0/2.0 NW_024972821.1 1320 12973 - uncharacterized LOC107437629 aug3.g12468 LOC107437629 0
LOC122274033 Ptep1.0/2.0 NW_024988066.1 24 472 + uncharacterized LOC122274033 aug3.g12469 NA 8e-69
12 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02