Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107437786 Ptep1.0/2.0 NW_024969751.1 718336 788386 + uncharacterized LOC107437786 aug3.g12585 LOC107437786 0
LOC107437788 Ptep1.0/2.0 NW_024969751.1 790916 814201 - outer mitochondrial transmembrane helix translocase aug3.g12584 LOC107437788 0
LOC107437789 Ptep1.0/2.0 NW_024969751.1 814288 817809 + uncharacterized LOC107437789 aug3.g12583 LOC107437789 0
LOC107437785 Ptep1.0/2.0 NW_024969751.1 818566 835915 - tetratricopeptide repeat protein 5 aug3.g12582 LOC107437785 0
LOC107437787 Ptep1.0/2.0 NW_024969751.1 836446 861322 + phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN aug3.g12581 LOC107437787 0
LOC122269400 Ptep1.0/2.0 NW_024969807.1 6886 19213 - uncharacterized LOC122269400 aug3.g12588 NA 0
LOC107446160 Ptep1.0/2.0 NW_024969892.1 64786 97397 - uncharacterized LOC107446160 aug3.g1258 LOC107446160 0
LOC107437771 Ptep1.0/2.0 NW_024970300.1 313235 318800 + glycerol kinase aug3.g12575,aug3.g12580 LOC107437771 0
LOC107437783 Ptep1.0/2.0 NW_024970300.1 410357 413769 + glycerol kinase-like aug3.g12580 LOC107437783 0
LOC107455829 Ptep1.0/2.0 NW_024970617.1 55930 142904 - uncharacterized protein CG3556-like aug3.g12588,aug3.g22343 LOC107437794,LOC107437792,LOC107437793,LOC107455829 0
LOC122271171 Ptep1.0/2.0 NW_024970617.1 151312 158007 - uncharacterized protein CG3556-like aug3.g12589 LOC107437791 0
LOC107447308 Ptep1.0/2.0 NW_024971214.1 25114 48192 - uncharacterized protein CG3556 aug3.g12588,aug3.g12589 LOC107447308 0
LOC107437791 Ptep1.0/2.0 NW_024972266.1 1588 16175 + uncharacterized LOC107437791 aug3.g12588 LOC107437791 0
LOC107436605 Ptep1.0/2.0 NW_024972589.1 230 18762 - uncharacterized protein CG3556 aug3.g12588,aug3.g22938,aug3.g12591,aug3.g11141,aug3.g19688 LOC107436605 0
LOC122273251 Ptep1.0/2.0 NW_024974951.1 123 5607 - outer mitochondrial transmembrane helix translocase-like aug3.g12584 LOC107437788 7e-106
LOC107437790 Ptep1.0/2.0 NW_024975111.1 7750 26349 - tolloid-like protein 1 aug3.g16826,aug3.g12587,aug3.g11142 LOC107437790 0
16 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02