Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107437851 Ptep1.0/2.0 NW_024969811.1 378377 532705 + iroquois-class homeodomain protein IRX-6 aug3.g12625,aug3.g20242 LOC107437851 0
LOC122270034 Ptep1.0/2.0 NW_024970024.1 438888 482142 + uncharacterized LOC122270034 aug3.g1262 LOC107446186 5e-92
LOC107446186 Ptep1.0/2.0 NW_024970024.1 487376 500541 + SEC14-like protein 2 aug3.g1262 LOC107446186 0
LOC107437860 Ptep1.0/2.0 NW_024970270.1 288019 313443 + kelch-like protein diablo aug3.g12629 LOC107437860 0
LOC107437858 Ptep1.0/2.0 NW_024970270.1 316762 329189 - glyceraldehyde-3-phosphate dehydrogenase aug3.g12628 LOC107437858 0
LOC107437859 Ptep1.0/2.0 NW_024970270.1 329412 352092 + mitochondrial 2-oxoglutarate/malate carrier protein aug3.g12627 LOC107437859 0
LOC107437856 Ptep1.0/2.0 NW_024970270.1 352481 397225 - sterol O-acyltransferase 1 aug3.g12626 LOC107437856 0
LOC122274001 Ptep1.0/2.0 NW_024986440.1 6 774 - sterol O-acyltransferase 2-like aug3.g12626 LOC107437856 0
8 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02