Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107446206 Ptep1.0/2.0 NW_024969786.1 3945039 3989787 - ETS-related transcription factor Elf-2 aug3.g1268 LOC107446206 0
LOC107437937 Ptep1.0/2.0 NW_024970240.1 435276 445076 - zinc finger protein Noc aug3.g12685,aug3.g23139 LOC107437937 0
LOC107437934 Ptep1.0/2.0 NW_024970636.1 158120 159493 - zinc finger protein 664-like aug3.g12680 LOC107437934 0
LOC107437929 Ptep1.0/2.0 NW_024970636.1 160188 174138 + intraflagellar transport protein 74 homolog aug3.g12681 LOC107437929 0
LOC107437935 Ptep1.0/2.0 NW_024970636.1 181066 211415 - vacuolar protein sorting-associated protein 33B aug3.g12682 LOC107437935 0
LOC107437936 Ptep1.0/2.0 NW_024970636.1 211614 242620 + exocyst complex component 3 aug3.g12683,aug3.g21791 LOC107452762,LOC107437936 0
LOC107437942 Ptep1.0/2.0 NW_024970654.1 212417 218738 - 60S ribosomal protein L35 aug3.g12688 LOC107437942 0
LOC107437940 Ptep1.0/2.0 NW_024970654.1 218774 249279 + USP6 N-terminal-like protein aug3.g12687 LOC107437940 0
LOC122271233 Ptep1.0/2.0 NW_024970654.1 272152 277274 + uncharacterized LOC122271233 aug3.g12686 NA 0.0000000000004
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02