Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107446237 Ptep1.0/2.0 NW_024969733.1 940777 948246 - eukaryotic translation initiation factor 1 aug3.g1280 LOC107446237 0
LOC107438085 Ptep1.0/2.0 NW_024970334.1 3471 35699 + pseudouridylate synthase 7 homolog aug3.g12808 LOC107438085 0
LOC107438084 Ptep1.0/2.0 NW_024970334.1 37561 142151 - pro-neuregulin-2, membrane-bound isoform aug3.g12807 LOC107438084 0
LOC107438083 Ptep1.0/2.0 NW_024970334.1 238091 396984 + plasma membrane calcium-transporting ATPase 2 aug3.g12805 LOC107438083 0
LOC107455518 Ptep1.0/2.0 NW_024970545.1 162724 411855 - protein eva-1 homolog C aug3.g7821,aug3.g12804 LOC107455518,LOC107438081 0
LOC107438068 Ptep1.0/2.0 NW_024970764.1 75946 174273 + nucleoprotein TPR aug3.g12800,aug3.g18092,aug3.g12801 LOC107438068 0
LOC107443935 Ptep1.0/2.0 NW_024971748.1 32658 72627 + cytochrome P450 3A31-like aug3.g14618,aug3.g3166,aug3.g238,aug3.g24728,aug3.g12806,aug3.g23978,aug3.g26748,aug3.g15837,aug3.g1490,aug3.g23542,aug3.g24780,aug3.g19948 LOC107443935 0
LOC122272979 Ptep1.0/2.0 NW_024973578.1 7 3596 + calphotin-like aug3.g12800 LOC107438068 1e-115
LOC122272978 Ptep1.0/2.0 NW_024973578.1 8328 10670 + uncharacterized LOC122272978 aug3.g12800 LOC107438068 7e-140
9 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02