Pt_spiderBASE v3

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]

Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107436820 Ptep1.0/2.0 NW_024969629.1 1320483 1354121 + chitobiosyldiphosphodolichol beta-mannosyltransferase aug3.g12820,aug3.g9476 LOC107436820 0
LOC107438106 Ptep1.0/2.0 NW_024969629.1 1336382 1359808 - unconventional myosin-XV aug3.g12821 LOC107438106 0
LOC107438097 Ptep1.0/2.0 NW_024969629.1 1368232 1391551 + WD repeat domain phosphoinositide-interacting protein 3 aug3.g12822,aug3.g22707 LOC107438097 0
LOC107438098 Ptep1.0/2.0 NW_024969629.1 1393755 1425596 + spermatogenesis-associated serine-rich protein 2 aug3.g12823 LOC107438098 0
LOC107438101 Ptep1.0/2.0 NW_024969629.1 1427224 1430436 + speckle-type POZ protein B-like aug3.g12824 LOC107438101 0
LOC107438108 Ptep1.0/2.0 NW_024969629.1 1433052 1436904 + speckle-type POZ protein B aug3.g12824 LOC107438108 0
LOC107438109 Ptep1.0/2.0 NW_024969629.1 1441356 1444707 + speckle-type POZ protein-like B aug3.g12825,aug3.g12826 LOC107438109 0
LOC107438110 Ptep1.0/2.0 NW_024969629.1 1446497 1452757 + speckle-type POZ protein-like aug3.g12826 LOC107438110 0
LOC107438111 Ptep1.0/2.0 NW_024969629.1 1456799 1462712 - uncharacterized LOC107438111 aug3.g12827 LOC107438111 0
LOC107438112 Ptep1.0/2.0 NW_024969629.1 1466122 1481578 + uncharacterized LOC107438112 aug3.g12828,aug3.g12829 LOC107438112 0
LOC107446235 Ptep1.0/2.0 NW_024969733.1 957288 1094761 - la-related protein 4 aug3.g1282,aug3.g1281,aug3.g1283 LOC107446235 0
LOC122272954 Ptep1.0/2.0 NW_024973473.1 363 2128 - uncharacterized LOC122272954 aug3.g12828 NA 0
12 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

[Top] [Home Ptep3.0] [Genes/Transcripts] [BLAST] [Info]
Last updated by Hiroki Oda, 2022.11.02