Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107455203 Ptep1.0/2.0 NW_024970021.1 1084 286328 + tight junction protein ZO-1 aug3.g6901,aug3.g13060 LOC107455203 0
LOC107446355 Ptep1.0/2.0 NW_024970064.1 599647 625132 - serine/threonine-protein phosphatase 4 regulatory subunit 3A aug3.g1306 LOC107446355,LOC110282003 0
LOC107438409 Ptep1.0/2.0 NW_024970159.1 275582 306826 - TD and POZ domain-containing protein 3 aug3.g13068,aug3.g13069,aug3.g13072,aug3.g13073,aug3.g13070 LOC107438409,LOC107438404 0
LOC107438408 Ptep1.0/2.0 NW_024970159.1 309636 315647 - protein maternal effect lethal 26 aug3.g13067 LOC107438408 0
LOC107438407 Ptep1.0/2.0 NW_024970159.1 323831 333460 - TD and POZ domain-containing protein 1 aug3.g13066,aug3.g13064,aug3.g13063,aug3.g13065 LOC107438407 0
LOC107438406 Ptep1.0/2.0 NW_024970159.1 338332 356012 - TD and POZ domain-containing protein 1-like aug3.g13062,aug3.g13061 LOC107438406 0
LOC122271488 Ptep1.0/2.0 NW_024970868.1 164457 201518 + uncharacterized LOC122271488 aug3.g13060 LOC107455203 0
7 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02