Pt_spiderBASE v3

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Single Cell/Nucleus UMAP Plot Search

Gene/Transcript Records
NCBI geneID (-> UMAP)Ptep1.0/2.0 (-> genome browser)Scaffold AN (-> genome browser)StartEnd+/-Productaug3ID in Ptep2geneID in Ptep2E-value(for checking the relationship)
LOC107446363 Ptep1.0/2.0 NW_024970274.1 248149 259393 + insulinoma-associated protein 1b aug3.g1310 LOC107446363 0
LOC107438446 Ptep1.0/2.0 NW_024970437.1 192149 196701 + protein Abitram aug3.g13100 LOC107438446 0
LOC107438450 Ptep1.0/2.0 NW_024970437.1 203401 217517 - protein phosphatase 1A aug3.g13101 LOC107438450 0
LOC107438449 Ptep1.0/2.0 NW_024970437.1 217649 226772 + uncharacterized LOC107438449 aug3.g13102 LOC107438449 0
LOC107438451 Ptep1.0/2.0 NW_024970437.1 234477 252229 + reticulon-3 aug3.g13103 LOC107438451 0
LOC107438452 Ptep1.0/2.0 NW_024970437.1 260397 286667 + peroxisomal acyl-coenzyme A oxidase 1 aug3.g13104 LOC107438452 0
LOC107438453 Ptep1.0/2.0 NW_024970437.1 287698 292236 - fidgetin-like protein 1 aug3.g13105 LOC107438453 0
LOC107438443 Ptep1.0/2.0 NW_024970437.1 292426 325921 + aspartyl/asparaginyl beta-hydroxylase aug3.g13107,aug3.g13106,aug3.g13108 LOC107438443 0
LOC107438454 Ptep1.0/2.0 NW_024970437.1 348713 354659 - inhibin beta chain aug3.g13108 LOC107438454 0
LOC107438460 Ptep1.0/2.0 NW_024970530.1 188013 191155 - uncharacterized LOC107438460 aug3.g13109 LOC107438460 1e-170
LOC107455502 Ptep1.0/2.0 NW_024973641.1 3021 4694 + uncharacterized LOC107455502 aug3.g13109 LOC107455502 4e-140
11 records were found.(Max.=1000)

Reference
Yasuko Akiyama-Oda, Takanori Akaiwa, and Hiroki Oda. (2022) Reconstruction of the Global Polarity of an Early Spider Embryo by Single-Cell and Single-Nucleus Transcriptome Analysis(Front. Cell Dev. Biol. 10:933220)

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Last updated by Hiroki Oda, 2022.11.02